KEGG   Sphingomonas sp. MS122: ACO227_15235
Entry
ACO227_15235      CDS       T11466                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
spms  Sphingomonas sp. MS122
Pathway
spms02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spms00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACO227_15235
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:spms02022]
    ACO227_15235
Two-component system [BR:spms02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   ACO227_15235
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_19 OKR_DC_1_N bpMoxR DAGK_cat B12-binding AAA_30 FleQ VpsR AAA AAA_22 AAA_28
Other DBs
NCBI-ProteinID: XRE09428
LinkDB
Position
complement(3133915..3135291)
AA seq 458 aa
MTLDILVVDDESDIRELVAGVLEDEGYETRGAADSDAALEAIAQRRPSLVLLDVWLQGSR
LDGLELLDEIKRRDASIPVLVISGHGNLDTAVAAIRRGASDFIEKPFEAERLLLLVERAT
ETERLRREVASLRASVGRETDLTGTSGSINGVRATLKRVAATGSRVMITGGPGTGKEVAA
RLLHEWSNRATGPFVIVSAARMTPERVEEELFGVEDGDLVHPGLLEQAHGGTLFLDEIAD
MPVATQGRILRVLTEQKFNRVGGQRQVKVDVRVVSATARDLMGEITEGRFREDLFYRLNV
VPVAIPPLTERREDIPPLVEHFVAHYASERRVPTPEVAPDAMVALQSYEWPGNVRQLRNV
VEATVILAPGDRIGRIDIDMLPTEVLGRRGSEGDGAGATAMMGAPLKEARETFEREYLRI
QIRRFSGNISRTAHFIGMERSALHRKLKLLGIHEGREE
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgacgttggacattctggtcgtcgacgacgagagcgacatccgcgagctggtcgcgggc
gtgctcgaggacgagggctatgagacgcgcggcgcggcggacagcgacgccgcgctggag
gcgatcgcgcagcggcggccgagcctggtgctgctcgacgtgtggctgcagggctcgcgg
ctcgacgggctcgagctgctcgacgagatcaagcggcgcgacgcctcgatcccggtgctg
gtcatctccggccatggcaatctcgacaccgcggtggcggcaatccggcgcggcgcatcc
gacttcatcgagaagccgttcgaggccgagcggctgttgctgctggtcgagcgcgcgacc
gagaccgagcggctgcggcgcgaggtcgcctcgctgcgcgcgagcgtggggcgcgagacg
gatctcaccggaacctcgggatcgatcaacggggtgcgcgcgacgttgaagcgcgtcgcg
gcgacgggcagccgggtgatgatcaccggcgggcccggcaccggcaaggaggtcgccgcg
cggctgctccacgaatggagcaaccgcgcgaccgggccgttcgtgatcgtgagcgcggcg
cggatgacccccgagcgggtcgaggaggaactgttcggcgtcgaggacggcgacctggtc
catcccgggctgctcgaacaggcgcatggcgggaccctgttcctcgacgagatcgccgac
atgccggtggcgacgcaggggcgcatcctgcgcgtgctgaccgagcagaagttcaaccgg
gtcggcgggcagcgacaggtcaaggtcgatgtccgcgtggtctccgccaccgcgcgcgat
ctgatgggcgagatcaccgaaggccgcttccgcgaggacctgttctaccggctcaacgtc
gtgccggtggcgatcccgccgctgaccgagcggcgcgaggacatcccgccgctggtcgag
catttcgtcgcgcattatgcgagcgagcggcgcgtgccgaccccggaggtcgcgcccgac
gcgatggtcgcgctgcaaagctatgaatggccgggcaatgtccgccagctgcgcaacgtg
gtcgaggcgaccgtgatcctggcgcctggcgaccgcatcggccggatcgatatcgacatg
ctgcccaccgaagtgctcgggcggcgcggcagcgagggcgacggcgccggcgcgaccgcg
atgatgggcgcgccgctcaaggaagcgcgcgagacgttcgagcgcgaatatctgcgcatc
cagatccggcgcttttcgggcaacatctcgcgcaccgcgcactttatcgggatggagcgg
tcggcactgcaccgcaagctcaagctgctcggaatccacgagggccgcgaggaatag

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