Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_0032
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Entry
SP_0032 CDS
T00057
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spn
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Pathway
spn03030
DNA replication
spn03410
Base excision repair
spn03420
Nucleotide excision repair
spn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SP_0032 (polA)
03410 Base excision repair
SP_0032 (polA)
03420 Nucleotide excision repair
SP_0032 (polA)
03440 Homologous recombination
SP_0032 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spn03032
]
SP_0032 (polA)
03400 DNA repair and recombination proteins [BR:
spn03400
]
SP_0032 (polA)
Enzymes [BR:
spn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SP_0032 (polA)
DNA replication proteins [BR:
spn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SP_0032 (polA)
DNA repair and recombination proteins [BR:
spn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SP_0032 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SP_0032 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Mt_ATP_synt
Motif
Other DBs
NCBI-ProteinID:
AAK74222
UniProt:
P59199
LinkDB
All DBs
Position
31535..34168
Genome browser
AA seq
877 aa
AA seq
DB search
MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNVAGLHTNAIYGFQLMLSHLLERVEPSHIL
VAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYDLAQYEADDIIG
TLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEEMGLTPAQ
FIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKTSKMKENLINDKE
QAFLSKTLATIDTKAPIAIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVSES
LDFTIVDQISQDMLSEESIFHFELFGENYHTDNLVGFVWSCGDKLYATDKLELLQDPIFK
DFLEKTSLRVYDFKKVKVLLQRFGVDLQAPAFDIRLAKYLLSTVEDNEIATIASLYGQTY
LVDDETFYGKGVKKAIPEREKFLEHLACKLAVLVETEPILLEKLSENGQLELLYDMEQPL
AFVLAKMEIAGIMVKKETLLEMQAENELVIEKLTQEIYELAGEEFNVNSPKQLGVLLFEK
LGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILADG
KIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWEDSVLLSSDYSQIELR
VLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPDDVTANDRRNAKAVNFGVVYGISDF
GLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSR
NFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKS
ELVEMKKLVKQTMEEAIQLSVPLIADENEGATWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaaaaattattattgattgatgggtcttctgtagcttttcgggcgtttttt
gcgctgtatcagcagttggaccgttttaagaatgtggctggtttgcataccaatgcgatt
tatggttttcagttgatgttgagtcatttattggagcgggttgagccgagtcatattttg
gtggcttttgatgcgggaaagacgaccttccggacagagatgtatgcggactataagggt
ggtcgggccaagactcctgatgagtttcgtgagcaatttcctttcattcgtgagttgctg
gatcatatggggattcgtcactatgatctggctcagtatgaggcggatgacatcattggg
acgctggataagctagcagagcaggatggttttgatattactattgtcagtggggacaag
gatttgattcagctgacggatgagcatacggtggttgaaatttccaagaaaggtgtggct
gagtttgaggcctttacgccagattacctcatggaagaaatgggcctcacaccagctcag
tttatcgatctcaaggcgctcatgggtgataagtcggataatatccctggggtgaccaaa
gtcggtgaaaagacgggtattaagctcttgctggagcatggttcgcttgaggggatttat
gaaaatattgatggaatgaagacttctaagatgaaggaaaatctcatcaatgacaaggaa
caggcctttttgtctaaaacactagcgaccattgataccaaggcaccgattgcgattggt
ttagaggacttggtctatagtggtccagatgttgaaaatcttgggaaattctacgatgag
atgggcttcaaacagctaaagcaggctttaaatgtgtcgtcagctgatgtgtctgagagt
ttggattttactattgttgaccaaatcagtcaagatatgctgagtgaagagtctatcttc
cactttgagctttttggtgagaattaccatacggataatttggttggatttgtctggtct
tgtggggataagctctatgccacagacaagcttgagctgttgcaagacccgattttcaag
gatttcttagaaaaaacatctctgagagtttatgactttaagaaggttaaagttcttttg
caacgttttggtgtggatttgcaggcgcctgcttttgacatccgtttggctaaatacctc
ctttcgactgtggaggacaatgaaattgcgaccatcgctagtctttatggtcagacttac
ttggttgatgatgaaactttctacggtaagggtgttaaaaaggccattcctgaacgtgag
aaattcttggaacacttagcttgtaaacttgctgttttggtagaaacagagcctatttta
cttgaaaaactcagcgaaaatgggcaattagagcttctttatgatatggagcaacctctg
gcttttgtccttgccaagatggaaattgctgggattatggtcaagaaagagaccttgctt
gagatgcaggctgaaaatgagcttgtcattgaaaaactgactcaagagatttacgagctg
gctggtgaggagtttaatgtcaactcgcctaagcagttgggcgtgcttctctttgagaaa
ttgggacttcctctagaatacactaagaaaaccaagacaggttattcgacagcagtggat
gttttagagcgtctcgctcctattgctccgattgttaagaaaatcctggattaccgtcaa
attgctaagattcaatctacttatgtaattggcttgcaggactggattttggctgatgga
aagattcatactcgctatgtgcaggatttgacccagaccgggcgtttgtctagtgtggat
ccaaacttgcaaaatattcctgcccgattggaacaggggcgcttgattcggaaggctttt
gtgccagagtgggaggatagtgtgctactcagctctgactattcacagattgaattgcgc
gttttggcgcatatttctaaggatgagcacttgattaaggccttccaagagggggcagat
atccatacttcgacagccatgcgggtctttggcattgagcgtcctgatgatgtgactgca
aacgaccgtcgcaatgccaaggcagttaactttggagtggtttatgggatttcagacttt
ggcttgtctaataatttgggaattagtcgtaaggaagccaaagcctacattgatacctac
tttgaacgttttccaggtattaaaaactacatggatgaagtggtgcgggaggcgcgtgat
aagggctatgtagagaccctctttaagcgtcgccgtgagttgccagatatcaattcgcgc
aacttcaatattcgtggttttgcggagcgaactgctatcaactcacctatccagggttcg
gcagcagatattctcaagattgccatgattcagctggataaagccttggttgcaggtggt
tatcagactaagatgctgttacaagtgcacgatgaaatcgtccttgaagtgcctaaatct
gaattggtagagatgaaaaaattggtgaaacaaaccatggaagaagccattcaactcagt
gttcctcttatcgcagatgagaatgaaggggcaacctggtacgaggctaaataa
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