Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_0613
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Entry
SP_0613 CDS
T00057
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spn
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Pathway
spn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SP_0613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spn03019
]
SP_0613
Messenger RNA biogenesis [BR:
spn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SP_0613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
SUFBD_core
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
AAK74765
UniProt:
A0A0H2UNZ5
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Position
579849..581510
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AA seq
553 aa
AA seq
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MSNISLTTLGGVRENGKNMYIAEIGESIFVLNVGLKYPENEQLGVDVVIPNMDYLFENSD
RIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFNDFHVIDE
NTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATDFARLAE
IGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSRIQQIFD
AADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIILETGRMG
EPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVKLITQSL
HVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFIPKKGTTMA
YENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNRREKKIVAR
ARVHTRGFVYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNLTKYLFDQTK
RRPAILPVVMEAK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatatcagtttaacaacacttggtggtgtgcgtgagaatggaaaaaatatgtac
attgctgaaattggagagtccatttttgttttgaatgtagggttaaaatatcctgaaaat
gaacaattaggggtcgatgtggtgattccaaacatggattacctttttgaaaatagcgac
cgtattgctggggttttcttgacccacgggcatgcggatgccattggtgctctaccgtat
ctcttggcagaggctaaagttcctgtatttgggtctgagttgaccattgagttggcaaag
ctctttgtcaaaggaaatgatgccgttaagaaatttaatgatttccatgtcattgatgag
aatacggagattgattttggtgggacagtggtttccttcttccctacgacttactccgtt
ccagagagtctgggaattgtcttgaagacatcggaaggaagcatcgtttatacaggtgac
ttcaaatttgaccaaacggctagtgaatcttatgcaactgattttgctcgtttggcagag
attggtcgtgacggcgtcctggctctcctcagtgattcggccaatgcagacagcaatatt
caggtggctagtgaaagtgaagttagggatgaaattacccaaactattgctgactgggaa
ggtcgtatcatcgttgcagctgtttccagtaatctttctcgtattcagcagatttttgac
gctgcggataaaacaggtcgacgtatcgtcttgacaggatttgatattgaaaatatcgtc
cgcacagcgattcgtcttaagaagttgtctttagccaacgaaattcttttgattaagcct
aaagatatgtctcgctttgaagaccatgagttgattattcttgagacaggtcgtatgggt
gagcctatcaatggacttcgtaagatgtcgattggtcgccatcgttatgtagaaatcaag
gatggggacctagtctatattgctacggctccgtctattgctaaagaagcctttgttgcg
cgtgtggaaaatatgatttatcaggcaggtggggttgtcaaattgattacccaaagttta
catgtatcagggcacggaaatgtgcgtgatttgcagctgatgatcaatcttttgcaacct
aagtacctcttccctgtccaaggggagtatcgtgagttggatgctcacgctaaggctgcc
atggcagttgggatgttgccagaacgcatcttcattcctaaaaaggggacgaccatggct
tacgagaatggagactttgttccagctggatcggtttcagcaggagatatcttgattgat
gggaatgccattggtgatgttggaaatgttgttcttcgtgaccgtaaggtcttgtcagag
gatggaattttcatcgtggctattacagtcaaccgtcgtgagaagaaaattgtggctagg
gctcgtgttcacacgcgtggatttgtttatctcaagaagagtcgcgatattctccgtgaa
agttcagaattgattaaccaaacggtagaagagtatcttcaaggagatgactttgactgg
gcagatctcaaaggtaaggttcgtgacaatctgaccaagtacctctttgatcaaaccaag
cgtcgcccagccattttaccagtagtcatggaagcaaaataa
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