Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_0895
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Entry
SP_0895 CDS
T00057
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spn
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Pathway
spn03030
DNA replication
spn03430
Mismatch repair
spn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SP_0895 (dnaE)
03430 Mismatch repair
SP_0895 (dnaE)
03440 Homologous recombination
SP_0895 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spn03032
]
SP_0895 (dnaE)
03400 DNA repair and recombination proteins [BR:
spn03400
]
SP_0895 (dnaE)
Enzymes [BR:
spn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SP_0895 (dnaE)
DNA replication proteins [BR:
spn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SP_0895 (dnaE)
DNA repair and recombination proteins [BR:
spn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SP_0895 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
SSB
Motif
Other DBs
NCBI-ProteinID:
AAK75022
UniProt:
A0A0H2UPJ0
LinkDB
All DBs
Position
847061..850189
Genome browser
AA seq
1042 aa
AA seq
DB search
MRRIEEKCKLIAQLDTKTVYSFMESVISIEKYVRAAKEYGYTHLAMMDIDNLYGAFDFLE
ITKKYGIHPLLGLEMTVFVDDQGVNLRFLALSSVGYQQLMKLSTAKMQGEKTWSVLSQYL
EDIAVIVPYFDRVESLELGCDYYIGVYPETLASEFHHPILPLYRVNAFESRDREVLQVLT
AIKENLPLREVPLRSRQDVFISASSLEKLFQERFPQALDNLEKLISGISYDLDTSLKLPR
FNPARPAVEELRERAELGLVQKGLTSKEYQDRLDQELSVIHDMGFDDYFLVVWDLLRFGQ
SNGYYMGMGRGSAVGSLVSYALDITGIDPVEKNLIFERFLNRERYTMPDIDIDIPDIYRP
DFIRYVGNKYGSKHAAQIVTFSTFGAKQALRDVLKRFGVPEYELSAITKKISFRDNLKSA
YEGNLQFRQQINSKLEYQKAFEIACKIEGYPRQTSVHAAGVVISDQDLTNYIPLKYGDEI
PLTQYDAHGVEASGLLKMDFLGLRNLTFVQKMQELLAETEGIHLKIEEIDLEDKETLALF
ASGNTKGIFQFEQPGAIRLLKRVQPVCFEDVVATTSLNRPGASDYINNFVARKHGQEEVT
VLDPVLEDILAPTYGIMLYQEQVMQVAQRLAGFSLGKADILRRAMGKKDASAMHEMRASF
IQGSLEAGHTVEKAEQVFDVMEKFAGYGFNRSHAYAYSALAFQLAYFKTHYPAIFYQVML
NSSNSDYLIDALEAGFEVASLSINTIPYHDKIANKAIYLGLKSIKGVSNDLALWIIENRP
YSNIEDFIAKLPENYLKLPLLEPLVKVGLFDSFEKNRQKVFNNLANLFEFVKELGSLFGD
AIYSWQESEDWTEQEKFYMEQELLGIGVSKHPLQAIASKAIYPITPIGNLSENSYAIILV
EVQKIKVIRTKKGENMAFLQADDSKKKLDVTLFSDLYRQVGQEIKEGAFYYVKGKIQSRD
GRLQMIAQEIREAVAERFWIQVKNHESDQEISRILEQFKGPIPVIIRYEEEQKTIVSPHH
FVAKSNELEEKLNEIVMKTIYR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaggatagaggagaagtgtaaattgatcgcacaactagatacaaaaacagtctat
agttttatggaaagcgtcatttcgatcgaaaagtatgtgagagcagctaaagaatacggc
tacactcatttggctatgatggatattgacaatctttatggcgctttcgactttctagag
attacaaaaaaatacggcattcatcctttgctagggcttgaaatgacagtgtttgtagat
gatcagggagtgaatttgcgctttttagctctatctagtgtgggctatcagcagttgatg
aagctttcgacagccaagatgcagggggagaaaacttggtcagtcctgtcccagtacctg
gaggatatcgcggtcattgtgccttattttgatagagttgagtcgttagaactaggctgt
gattactatataggggtttatccagaaacactagcaagcgaatttcatcatcctatctta
cctctttatcgggtcaacgcttttgaaagcagggatagagaagttcttcaagttttaaca
gcgattaaagaaaatctaccgctcagagaagttcccttgcgttcgagacaagatgtcttt
atatcagcaagttctttagagaaactattccaagagcgttttccgcaagctttggacaat
ttagaaaagcttatttcaggcatttcttacgacttggatactagtctgaaactgcctcgt
tttaatccagctagaccagcagtagaggagttgagagagcgtgctgaactggggcttgtt
cagaaggggttgactagtaaagaatatcaagatagactagaccaagaattgtctgttatt
catgatatgggctttgatgattatttcttggttgtttgggatttgttgcgttttggacaa
tcgaatggctattatatgggaatgggaaggggttctgcagtaggcagtttggtttcttat
gccttagacatcacggggattgacccagtagagaaaaatctgatttttgaacgctttctt
aatcgtgaacgctataccatgcctgatattgatattgatatcccagatatttatcgtcca
gattttatcagatatgttggtaataaatatggtagtaaacatgcggcacaaatcgttact
ttttcaacctttggagccaagcaagctcttcgagatgtcttgaaacgctttggtgtgcca
gagtatgaattatctgcaattactaagaaaatcagttttcgtgacaatcttaagtcggcc
tatgagggaaatctccagtttcgtcagcaaatcaatagtaagttagaataccaaaaagct
tttgagattgcttgcaagatagagggctatccaaggcaaacctctgtccatgcggctggt
gttgtaattagtgaccaagatttaaccaactacattcctctaaagtatggtgatgaaatt
ccactgactcagtatgatgctcatggagttgaggctagcggacttttgaagatggacttt
ctgggactacgaaatttgacctttgtccagaagatgcaagagttgcttgctgaaacagaa
ggtattcatctgaaaattgaagaaatcgatttagaagacaaagaaacgttagctttattt
gcctctggtaatacaaaaggtatctttcaatttgagcaaccaggtgccattcgtctgctt
aagcgtgtgcaaccagtctgttttgaagatgtcgtcgcgactacttctctaaatcgaccg
ggtgctagtgactatatcaataattttgtggcaagaaagcatgggcaggaagaagtgact
gttctggatccagtactggaggatattttggctccaacctacggcataatgctctatcag
gagcaggttatgcaggttgcccagcgacttgccggatttagtcttgggaaagccgatatt
ttgcgtcgggctatggggaaaaaggatgcctctgccatgcatgagatgagggcttccttt
attcaaggttcattagaagctggtcatactgtggaaaaagcagagcaggtctttgatgtt
atggagaagtttgcaggttatggttttaacaggtcacacgcctatgcctactcagccttg
gccttccagttggcttatttcaaaacgcattatccagccattttttatcaggtcatgtta
aattcttccaacagtgattacttaatagatgcacttgaagcaggttttgaagtagcctct
ctatccatcaacaccattccctatcacgataaaattgccaacaaggccatctatctaggt
ttgaaatccattaaaggagtcagtaatgatttagctctctggattattgaaaatagacct
tattctaacattgaagattttatagctaaattacctgagaattatctgaaacttcctctg
ctagaacctttggtaaaagttggtcttttcgattcatttgaaaaaaatcgtcaaaaagta
tttaataacttagctaatctatttgaatttgtgaaagagttgggaagtttgtttggagat
gctatttatagttggcaggaatcggaagattggacggaacaagaaaaattttatatggaa
caagagcttttagggataggtgtcagcaaacatccactacaagctattgcaagtaaggct
atttacccgattaccccaatcggaaatttgtcagaaaatagctatgctattatcttggtt
gaagttcagaaaataaaagtgattcgtaccaaaaagggtgaaaatatggccttcttacag
gcagatgatagtaagaaaaaattggatgtcactctcttttcagacttatatcgtcaggtt
ggacaggaaataaaagagggagccttctactatgtaaaaggaaaaatacaatcacgtgat
ggccgtctgcaaatgattgcacaagaaataagagaagcagttgctgaacgcttttggata
caggtgaaaaatcatgaatcggatcaagaaatttcacgcattttagaacaatttaaaggc
ccaatcccagtcatcatccggtatgaagaggaacagaaaaccatcgtttctccccatcat
tttgtagctaaatccaatgaattagaggagaaattgaatgaaatcgttatgaaaacgatt
tatcgctaa
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integrated database retrieval system
