Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_1016
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Entry
SP_1016 CDS
T00057
Symbol
thdF
Name
(GenBank) thiophene and furan oxidation protein ThdF
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
spn
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Brite
KEGG Orthology (KO) [BR:
spn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spn03016
]
SP_1016 (thdF)
Transfer RNA biogenesis [BR:
spn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SP_1016 (thdF)
Prokaryotic type
Methyltransferases
SP_1016 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
GTP_EFTU
AIG1
RsgA_GTPase
Ras
KIF21A_2nd
Roc
MMR_HSR1_Xtn
cobW
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAK75131
UniProt:
Q97R24
LinkDB
All DBs
Position
complement(960558..961931)
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AA seq
457 aa
AA seq
DB search
MITREFDTIAAISTPLGEGAIGIVRLSGTDSFAIAQKIFKGKDLNKVASHTLNYGHIIDP
LTGKVMDEVMVGAMKSPKTFTREDIIEINTHGGIAVTNEILQLAIREGARLAEPGEFTKR
AFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSDLINNTRQEILNTLAQVEVNI
DYPEYDDVEEATTAVVREKTMEFEQLLTKLLRTARRGKILREGISTAIIGRPNVGKSSLL
NNLLREDKAIVTDIAGTTRDVIEEYVNINGVPLKLIDTAGIRETDDIVEQIGVERSKKAL
KEADLVLLVLNASEPLTAQDRQLLEISQETNRIILLNKTDLPETIETSELPEDVIRISVL
KNQNIDKIEERINNLFFENAGLVEQDATYLSNARHISLIEKAVESLQAVNQGLELGMPVD
LLQVDLTRTWEILGEITGDAAPDELITQLFSQFCLGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgattacacgtgaatttgataccatcgctgctatctctactccactaggtgaaggggct
attggtattgtccgcctgagcggaacagacagttttgctattgcgcaaaagatttttaaa
ggaaaagacttgaacaaggttgccagccacactctcaactacggtcacattattgatcct
ctgactggtaaagtcatggacgaggttatggttggggctatgaagtctccaaagaccttc
actcgtgaggatattatcgagattaacacccacggtgggattgcggtgaccaatgaaatt
ctccagctagctattcgtgaaggggctcggttggcagaacctggtgaatttaccaaacgt
gcttttttaaacggtcgcgtagacttgacacaggcagaggctgtgatggatatcatccgt
gccaagactgacaaggccatgaacattgcggtcaaacaattagacggctccctttctgac
ctcattaacaatacccgtcaagaaatcctcaatacacttgcccaagttgaggtcaatatc
gactatcctgagtatgacgatgttgaggaagccactactgctgttgtccgagagaagaca
atggagtttgagcaattactaaccaaactccttaggacagcacgtcgtggtaaaatcctt
cgtgaaggaatttcaacggctatcattggacgtcccaacgttgggaaatcaagccttctc
aacaacctcttgcgtgaggacaaggctatcgtaacagatatcgctgggacaacacgagat
gtcatcgaagagtacgtcaacatcaatggtgtacctctcaaattgattgatacagccggt
attcgtgaaacggatgatatcgttgaacaaattggagttgagcgttcgaaaaaagctctt
aaggaagctgacctagttctgctagtactaaacgctagtgaaccactaaccgcccaagat
cgccaactcctagaaatcagtcaggagactaatcgcattattcttcttaacaaaactgac
ctgcctgaaacgattgaaacttcggaactacctgaagatgtcatccgcatttcagttctt
aaaaatcaaaacatcgataaaatcgaagagagaatcaacaacctcttctttgaaaatgct
ggtttggttgagcaagatgctacctacttgtcaaacgcccgtcacatttccttgattgag
aaggccgttgaaagcctacaagctgttaaccaaggtcttgaactagggatgccagttgac
ttgcttcaagttgacttgacccgtacttgggaaattctaggagaaatcactggagatgct
gctccagatgaactcatcacccaactctttagccaattctgtttaggaaaataa
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