Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_1073
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Entry
SP_1073 CDS
T00057
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
spn
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Pathway
spn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SP_1073 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spn03021
]
SP_1073 (rpoD)
Transcription machinery [BR:
spn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SP_1073 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
WHD_DprA
Motif
Other DBs
NCBI-ProteinID:
AAK75186
UniProt:
P0A4I9
LinkDB
All DBs
Position
1010183..1011292
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AA seq
369 aa
AA seq
DB search
MATKQKEVTTFDVQVAEFIRNHKQKGTATDDEINASLVIPFTLDADGIEDLLQRIQDAGI
SITDNEGNPSARVLSNEEEPELSDEDLIGSTSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
ALAVEAGDIEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQL
DEILDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRQPSRS
KPLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacaaaaagaagtaacaacatttgacgtacaggtagcagaatttatccgt
aatcataagcaaaaagggacagcaacagatgatgaaatcaatgcaagtctggttattcct
tttaccttggacgctgatgggattgaagatctcttgcaacggattcaggatgcaggcatt
tctatcacagataacgaaggaaatccaagtgcgcgtgttctcagcaatgaagaagaacca
gaactcagcgatgaggacttgattgggtcaacttctgctaaggtcaatgaccctgtccgt
atgtacttgaaagaaataggggtcgttcctctcttgaccaatgaagaggagaaagagttg
gcactggctgttgaagctggtgatatcgaagccaaacaacgtcttgcggaagccaatctt
cgtttggttgtttccattgccaaacgctatgtcggtcgtggtatgcagttccttgacttg
attcaagaaggaaatatgggcttgatgaaggcggttgacaagtttgactattctaaaggg
ttcaagttttcaacttatgcaacttggtggattcgtcaggctatcactcgtgctattgcg
gaccaagctcgtaccatccgtatcccagttcacatggttgaaactatcaataaattggtt
cgtgaacagcggaatctccttcaagaattggggcaagatccgacaccagaacagattgct
gaacgaatggatatgacacctgataaggttcgtgaaatcttgaagattgcccaagaacca
gtatctcttgaaactcctatcggtgaagaggacgatagccaccttggagactttatcgaa
gatgaagtgattgaaaatccagtggattatacgactcgtatcgtcttgcgtgagcaattg
gatgaaatcttagatactcttacagaccgtgaagaaaatgttctgcgtctacgttttgga
ctagatgatggaaaaatgcgcacacttgaagatgtggggaaagtctttaacgtaactcgt
gagcgtatccgtcagattgaagcaaaggctttgagaaaactacgccaaccaagtcgtagc
aaaccgcttcgtgattttattgaagactaa
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integrated database retrieval system
