Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_1739
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Entry
SP_1739 CDS
T00057
Name
(GenBank) KH domain protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
spn
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Pathway
spn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SP_1739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spn03019
]
SP_1739
Messenger RNA biogenesis [BR:
spn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SP_1739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
DUF6981
ATP-synt_B
V-ATPase_G
KH_NusA_2nd
DivIVA
KH_KhpA-B
dUTPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
AAK75815
UniProt:
P67282
LinkDB
All DBs
Position
complement(1643241..1644845)
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AA seq
534 aa
AA seq
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MSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLLVNE
AKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDDNLT
SKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQTEEN
LTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKGRII
GREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPARIEE
LVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAKL
AGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTIASH
HGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFALQA
GREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgcgattgctgtttttgccgtcatcattggtttagtcattggatatgtcagc
atctcagctaagatgaaatcatctcaggaagctgcagagttgatgcttttaaatgctgaa
caagaagcaactaatttacgtggacaagctgagcgtgaagcggatttacttgttaatgaa
gccaaacgtgaaagcaagtctcttaaaaaagaagcactattggaggccaaagaagaagcc
agaaaataccgtgaagaagtggacgctgaattcaaatcagaacgtcaagaactcaaacaa
atcgaaagtcgtttgacagagagagctactagccttgaccgtaaggacgacaatttgacg
agtaaagaacaaacacttgaacaaaaagaacaaagtatttctgatagagcgaaaaacctt
gatgcgcgtgaagagcaattagaggaagtcgaaagacaaaaagaagcagaactagagcgt
attggtgcgctgtctcaggcagaagcacgagatattatcttggctcagacagaggaaaac
ttgaccagggagattgccagtcgcattcgcgaagctgagcaagaggtcaaggaacgttct
gacaaaatggccaaggacatcttggttcaagctatgcaacgtatcgctggtgaatatgta
gcggagtcaacaaactcaacagttcatctgccagacgatactatgaagggacgcattatt
ggtcgtgaaggtcgtaacattcgtacctttgaaagtttgacaggggtcgatgtgattatc
gacgatacaccagaagtggtgaccttgtcaggatttgatccgattcgtcgtgagattgcc
cgtatgactatggaaatgttgctcaaagatggtcgtatacatccagctcgtatcgaagag
ttggttgagaaaaaccgtcaagagattgacaataagattcgtgaatacggtgaggctgct
gcctatgaaattggtgcgccaaaccttcatccagacttgatgaagattatgggacgtttg
cagttccgtacttcatatggacaaaatgttttgcgccattcgattgaggttgctaagttg
gctggtatcatggcgagcgaacttggtgaaaatgcggctcttgcccgtcgtgctggattc
cttcacgatatcgggaaagccattgaccatgaggttgaaggtagccacgttgaaatcggt
atggaattggcccgtaagtacaaggaacccccagttgtggtgaatacgattgctagtcac
cacggagatgttgaagctgagagcgtgatagcagttatcgtcgctgcagcagatgccttg
agcgcagcccgtccaggtgctcgtagtgagtctcttgaaagctacatcaagcgtctccat
gatttggaagaaattgctaacggctttgaaggagtgcaaactagctttgcccttcaagca
ggacgtgaaattcgtatcatggtcaatccaggaaaaatcaaggacgacaaagtcacaatc
ttggctcacaaagttcgtaagaaaattgaaaacaatctcgattatccaggaaatatcaag
gtaaccgtgattcgcgagcttcgtgcagtagattatgctaaataa
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