Sphingomonas sp. NIBR02145: O3305_00055
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Entry
O3305_00055 CDS
T10953
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00300
Lysine biosynthesis
spnb01100
Metabolic pathways
spnb01120
Microbial metabolism in diverse environments
spnb01230
Biosynthesis of amino acids
Module
spnb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O3305_00055 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spnb01002
]
O3305_00055 (dapE)
Enzymes [BR:
spnb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
O3305_00055 (dapE)
Peptidases and inhibitors [BR:
spnb01002
]
Metallo peptidases
Family M20
O3305_00055 (dapE)
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SSDB
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Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
UBA_5
Motif
Other DBs
NCBI-ProteinID:
WHU03044
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Position
complement(11337..12467)
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AA seq
376 aa
AA seq
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MPETILPDAIELTKALIAAESVTPARGSVFDVLEAALLPLGFKVERFIEGEAPDGPVENL
LAVRGTSGRHFAFAGHLDVVPPGQGWTSGAFAPEIRGDLLYGRGAVDMKGAIAAFVAAAA
QVEGGVTTLIITGDEEGPATFGTPRLIERMAERGLLPDLCLVGEPTSQHRLGDMIKIGRR
GSTVIDIVVPGRQGHVAYPHLADNPVPRLVRALAEIDAIVLDEGNAWFQPSNIEIIDLTV
GNPATNVIPGEAKARVSIRFNDQQYGPDLIARIEEIMQRHAPLGIVKGRVYGEAFLTEPG
ELSTLVAGAIEAKLGVIPELSTTGGTSDARFLSKLCPVVEFGLLNATMHKLDEAVALADL
EALTDVYEEILRRAVA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaccatcttgcccgacgcaatcgaactgaccaaggccctgatcgcagccgag
agcgttacccccgcgcggggcagcgtgttcgatgtgctggaggcagccctcctccccctc
ggcttcaaggtcgagcgcttcatcgaaggcgaggcgccggacgggccggtggagaacctg
ctcgcggtgcgcggcaccagcggtcgccacttcgcctttgccggccatctcgacgtggtg
ccgccgggccagggctggaccagcggcgccttcgcacccgaaatccgtggcgacctgctc
tacggccgtggtgccgtcgacatgaagggtgcgatcgccgccttcgtcgccgcggcggcg
caagtcgaaggcggcgtgaccacgctgatcatcaccggcgacgaggaaggccccgctacc
ttcggcacgccgcgcctgatcgaacggatggccgagcgcggcctgctgcccgacctctgc
ctggtcggcgagccgacctcgcagcaccgcctcggcgacatgatcaagatcggccgccgc
ggctcgacggtgatcgatatcgtcgtgccgggcaggcagggacatgtcgcctacccgcac
ctagccgacaacccggtcccgcgcctcgtccgcgcgctggccgagatcgatgcgatcgtg
ctggacgagggcaatgcctggttccagccctcgaacatcgagatcatcgaccttaccgtg
ggcaatcccgctaccaacgtcattccaggcgaggcgaaggcgcgggtcagcatccgcttc
aacgaccagcaatatggccccgacctgatcgcgcggatcgaggagatcatgcagcgccac
gcgcccttgggcatcgtcaaggggcgcgtctatggcgaggccttcctcaccgagccgggc
gagctctccacgctggtcgccggcgcgatcgaggctaagctgggagtgatcccggagctt
tcgactaccggcggcacctccgacgcgcgcttcctgtcgaagctctgcccggtggtcgag
ttcggcctgctcaacgcgacgatgcacaagctcgacgaagccgtggcgcttgccgacctg
gaggcgctgacggatgtgtacgaggagattttaaggcgcgcggtggcctga
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