Sphingomonas sp. NIBR02145: O3305_00525
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Entry
O3305_00525 CDS
T10953
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spnb03400
]
O3305_00525 (radA)
DNA repair and recombination proteins [BR:
spnb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
O3305_00525 (radA)
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Ortholog
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GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
RecA
Lon_C
AAA_16
AAA_30
AAA
AAA_22
NTPase_1
NACHT
nSTAND3
CbiA
MeaB
Glyco_hydro2_C5
SLFN-g3_helicase
Rad51
AAA_5
AAA_29
PAXNEB
DUF7125
AAA_14
DAP3
Motif
Other DBs
NCBI-ProteinID:
WHU03133
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Position
115551..116921
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AA seq
456 aa
AA seq
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MAKLKKRYVCQACGSVSSQWAGQCADCGEWNQLVEDSGANVTPFQAKHNLQSGGRAIMLT
GLNTDIALPERTSTGIAEFDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAASIASRGLK
VAYVSGEEAADQVRLRARRLGLGKAPVMLAAATSVRDILTTMGESEPPALLIIDSIQTMH
SDLIEGAPGTVSQVRASSGELIRFAKERGTAVVLVGHVTKDGSIAGPRVLEHMVDTVLAF
EGERSHQYRILRAVKNRFGGTDEIGVFAMQSEGLEEVTNPSALFLTQRDESVTGTVVFPA
LEGTRPVLIEVQALTVRLASGATPRRAVVGWDSARLSMILAVLEARCGLSFSTCEVYLNI
AGGYRVQDPAADLAVAAALVSALSERPIPADAVVFGEIALSGEVRPVAHGALRCREASKL
GFERAMAPMAQVNDKGGLSLAGFKSLAQFVDHLLGR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaactcaagaagcgttatgtctgccaggcctgcggctcggtctcctcgcaatgg
gcggggcagtgtgccgattgcggggagtggaaccagctcgtcgaggattccggcgcgaac
gtgacgccgttccaggcgaagcataaccttcagtccggtgggcgggcgatcatgctcacc
gggctcaacaccgatatcgcgctgcccgagcggacctcgaccgggattgccgagttcgat
cgcgcgctgggtggtggcttcgtcgagggctcggcgacgctgatcggcggcgatcccggc
atcggcaagtcgacgctccttctgcaggcggcagccagcatcgcctcgcggggtctcaag
gtcgcctatgtctcgggcgaggaagcggcggaccaggtgcggctgcgcgcgcggcggctg
ggtctgggcaaggcgccggtgatgctcgccgcggcgacatcggtgcgcgacatcctgacg
acgatgggcgagagcgagccgcccgcactgctcatcatcgactccatccagaccatgcat
tcggacctgatcgaaggtgcgccgggcacggtgagccaggtgcgtgcctcgtccggcgag
ctgatccgcttcgccaaggagcggggaacggcggtagtgctggtcggccatgtcaccaag
gacggcagcatcgccgggccgcgcgttctcgagcatatggtcgataccgtgctggcgttc
gagggcgagcgcagccaccagtatcgcatcctccgcgccgtcaagaaccgcttcggcggc
accgacgagatcggcgtgttcgcgatgcagtccgaggggctggaggaagtgaccaatcct
tccgcgctgttccttacgcagcgtgacgagagcgtgaccggcacggtggtgttcccggcg
ctggagggcacccggccggtgttgatcgaagtgcaggcgctgaccgtgcggctggcgagc
ggcgcgacgccgcggcgcgcggtggtcggctgggattcggcgcggctgtcgatgatcctt
gcggtgctggaagcgcgctgcgggctgagcttctcgacctgcgaagtctatctcaacatc
gccggcggctaccgggtgcaggatcccgcggcggacctggcggtggcggcggccctggtc
tcggcgctcagcgagcggccgatcccggcggatgccgtggtgttcggcgagatcgcgcta
tcgggcgaagtgcggccggtggcgcatggcgcgctgcgctgccgggaagcttcgaagctg
ggcttcgagcgggcgatggcgccgatggcgcaggtgaacgacaagggcgggctgtcgctc
gcggggttcaagtcgctcgcgcagttcgtggatcatctgctggggcgatag
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