Sphingomonas sp. NIBR02145: O3305_01600
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Entry
O3305_01600 CDS
T10953
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00330
Arginine and proline metabolism
spnb00480
Glutathione metabolism
spnb01100
Metabolic pathways
spnb01110
Biosynthesis of secondary metabolites
spnb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
O3305_01600
09106 Metabolism of other amino acids
00480 Glutathione metabolism
O3305_01600
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
O3305_01600
Enzymes [BR:
spnb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
O3305_01600
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WHU03330
LinkDB
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Position
complement(344693..345934)
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AA seq
413 aa
AA seq
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MHQHHRALGLAPLSTAGINVTGIDIAKQGPVQPVTLVRPHAAARAARFFVEKFPGKAMYA
VKANPSPELLQILWENGITTYDVASIGEVRLVARTLPEATLCFMHPVKAEEAIEEAYFTH
GVRTFSLDSLEELEKIVRATSRDGVTASDLTLCVRLRVSSDHSKLSLASKFGAGPGEAAK
LLFETRQVADALGICFHVGSQAMSPEAYSNAMERVRQAIIESAVTVDVIDVGGGFPSVYP
GMTPPPLEAYFETIHRAFESLPISYSAELWAEPGRALCAEYSSIVVRVERRRGAELYIND
GAYGALFDAAHIDWKFPVELLREPESNAKDVEFSFYGPTCDDLDYMKGPFLLPADTRAGD
YFEIGMLGAYGSAMRTAFNGFGTDATVVVADEPMASMYVELAERQPAWNVVKL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcaccagcatcatcgcgcgctggggttagcacccctttcgaccgccggcatcaacgtc
accggcatcgacatcgctaagcagggtccggttcagccggtcacgctcgtccgtccgcat
gctgcggcacgggccgcacggttcttcgtcgagaagttcccgggcaaggccatgtatgcg
gtaaaggcgaacccttcgcccgaactgctgcagatcctgtgggaaaacggcatcaccacc
tatgatgtggcgtcgatcggcgaagttcgcctggtcgcccgcacgctgcccgaagccacg
ctctgcttcatgcatccggtcaaggccgaggaagcgatcgaagaggcgtacttcacccat
ggcgtccgcaccttctcgctcgacagccttgaggagctggagaagatcgtccgcgccacc
agccgcgacggcgtgaccgcgagcgacctgacgctctgcgtgcgcctgcgcgtctcgtcg
gaccattcgaagctgagcctcgcgtcgaagttcggcgccggcccgggtgaagccgccaag
ctgctgttcgagacccgccaggtcgccgacgcgctgggcatctgcttccatgtcgggtcg
caggcgatgtcgccggaagcctattcgaacgcgatggagcgcgtgcgccaggcgatcatc
gagtcggcggtcaccgtggacgtgatcgacgtcggcggcggcttcccctcggtctatccg
ggcatgaccccgccgccgctcgaagcctatttcgagacgatccaccgcgcgttcgagagc
ctgccgatctcctattcggccgagctctgggccgagccgggccgtgcgctgtgcgccgag
tacagctcgatcgtggtgcgcgtggagcgtcgccgcggggcggagctgtacatcaacgac
ggcgcctatggcgcgctgttcgacgccgcgcatatcgactggaagttcccggtcgagctg
ctgcgcgaaccggaatcgaacgccaaggacgtcgagttcagcttctacggcccgacctgc
gacgatctcgattacatgaagggtccgttccttctgccggcggatacccgcgcgggcgac
tatttcgagatcggcatgctcggcgcctatggctcggcgatgcgcaccgcgttcaacggc
ttcggcaccgacgcgaccgttgtcgtggcggacgaaccgatggcctcgatgtatgtcgag
ctcgcggaacgccagccggcgtggaacgtcgtcaagctgtaa
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