Sphingomonas sp. NIBR02145: O3305_01670
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Entry
O3305_01670 CDS
T10953
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb03030
DNA replication
spnb03430
Mismatch repair
spnb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O3305_01670
03430 Mismatch repair
O3305_01670
03440 Homologous recombination
O3305_01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spnb03032
]
O3305_01670
03400 DNA repair and recombination proteins [BR:
spnb03400
]
O3305_01670
Enzymes [BR:
spnb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O3305_01670
DNA replication proteins [BR:
spnb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O3305_01670
DNA repair and recombination proteins [BR:
spnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O3305_01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
RuvB_N
AAA_30
AAA_16
AAA_19
AAA_14
AAA_18
AAA_24
AAA_assoc_2
DUF815
Glyco_tranf_2_5
PIF1
Motif
Other DBs
NCBI-ProteinID:
WHU03343
LinkDB
All DBs
Position
353479..355098
Genome browser
AA seq
539 aa
AA seq
DB search
MSDSFLGLDEPAQPRDNAYRVLARKYRPQTFSELIGQDAMVTTLGNAIKRDRLAHAFLLT
GVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGVCEPCRAIAEGRHIDVIEMDAASHT
GVDDVREIIEASRYSAVSARYKIYIIDEVHMLSKSAFNALLKTLEEPPAHVKFLFATTEV
NKVPVTVLSRCQRFDLRRIPAELLAEHFAKVTQAEGFEAEPEALALISRAAEGSARDGLS
ILDQAIAHAGLEGEGVKAEAVRQMLGLSDRGAIRTLFGLLLEGDAQGALASLRGQYDLGV
DPQAVLRTLLETVHAVTLAKLGTDANSGQSAEELKSLERWAAGLSFPALHRLWQLVLRGH
DEVARAVLPIEAAEMALLRVIHASQLPDPGELARQIASGSVTISGGAAPAPSGTNGSAMP
TSLGQLADYLEEKKRYQLATQVRDYLRPVRFEGMEVEFAAAKPLPFDFMKELGAALKELT
GTNWKLACVDVPAQAMTLREEQAASEQAERDAVLASPLVAAAMEAFPDAELIGWAKTGS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccttccttggcctcgacgaacccgcgcagccgcgtgacaacgcctatcgg
gtgctcgcgcgcaaataccgtccgcagaccttttccgagctgatcgggcaggatgcgatg
gtcaccacgctgggcaacgcgatcaagcgcgaccggctggcgcacgccttcctgctcact
ggggtccgcggggtcggcaagacctcgaccgcgcgcctgatcgccaaggcgctcaactgc
atcggtccggacgggcagggcgggccgacgatcgacccgtgcggcgtctgcgagccgtgc
cgcgcgattgccgagggccgccatatcgacgtgatcgagatggatgccgccagccatacc
ggcgtcgacgacgtccgcgagatcatcgaggcgtcgcgttattcggcggtctcggcgcgc
tacaagatctacatcatcgacgaagtccacatgctgtcgaagagcgcgttcaacgcgctg
ctcaagacgctcgaggagccgccggcgcatgtgaagttcctgttcgccaccaccgaggtg
aacaaggtgccggtgacggtgttgtcgcgctgccagcgcttcgacttgcgccgcatcccg
gccgagctgctcgccgagcatttcgccaaggtgactcaggccgaaggtttcgaggcggag
ccggaagcgctggcgctgatctcccgggctgccgaaggttcggcgcgcgacggcttgtcg
atcctcgaccaggccatcgcccatgcgggcctggaaggcgaaggcgtgaaggcggaggcg
gtgcgccagatgctcggcctgtccgatcgtggcgcgatccgcaccttgttcggactgctg
ctggagggcgacgcgcagggcgcactggcttcgctgcgcggccagtatgacttgggtgtc
gatccgcaggccgtgctgcgcacgctgctggagaccgtgcatgcggtgacgctcgccaag
ctcggcaccgatgccaattcgggccagtcggccgaggagctgaagtcacttgagcgctgg
gcggcgggactgagcttcccggcgctgcaccggctgtggcagctggtgctgcgcgggcat
gacgaagtcgccagggcggtgctgccgatcgaggccgcggaaatggcgctgctgcgcgtc
atccacgcctcgcagctgcccgatccgggcgagcttgcccgccagatcgccagcggcagc
gtgaccatttcgggcggcgctgctcccgctccttccggtacaaacggctcggccatgccg
acctcgctcggccagctcgccgattatctggaggagaagaagcgctaccagcttgccacc
caggtgcgcgactatctgcggccggtgcgtttcgagggcatggaagtcgagttcgctgct
gcgaagccgctgccgttcgatttcatgaaggagctgggcgccgcgctcaaggagttgacc
ggcaccaactggaagcttgcctgtgtcgacgtgccggcgcaggcgatgacgctccgcgag
gagcaggcggcgagcgagcaggccgagcgtgatgcggtactcgcctcgccgctggttgcc
gccgcaatggaagcctttcccgatgccgagctgatcggctgggccaagactggaagctag
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