Sphingomonas sp. NIBR02145: O3305_01900
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Entry
O3305_01900 CDS
T10953
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb02024
Quorum sensing
spnb03060
Protein export
spnb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
O3305_01900 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
O3305_01900 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O3305_01900 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spnb02044
]
O3305_01900 (ffh)
Enzymes [BR:
spnb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
O3305_01900 (ffh)
Secretion system [BR:
spnb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
O3305_01900 (ffh)
Eukaryotic Sec-SRP protein
O3305_01900 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_30
Zeta_toxin
AAA_22
AAA_31
VirC1
AAA_19
ABC_tran
APS_kinase
AAA_16
6PF2K
AAA_24
ATP_bind_1
Thymidylate_kin
AAA_33
AAA_17
AAA_18
MobB
MMR_HSR1
AAA_5
T2SSE
Fer4_NifH
YqeC
AAA_28
KTI12
KAP_NTPase
AAA_7
NTPase_1
AAA_14
nSTAND3
ResIII
NPHP3_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
WHU03383
LinkDB
All DBs
Position
390714..392210
Genome browser
AA seq
498 aa
AA seq
DB search
MFESLSERLGGVFDRLRGRGALTEADVRTAMREVRIALLEADVALPVARDFVEKATEQAI
GHEVLRSVTPGQQVVKIVHDTLVDMLGPDTAELNIAVTPPAVIMLVGLQGSGKTTTTAKL
SRLLKSQGKKVMMASLDVNRPAAQEQLAVLGTQTEVSTLPIVAGQQPVEIARRALNAAKL
QGYDVLMLDTAGRLHVDQALMDEMKAVADIATPNEILLVVDSLTGQDAVNVASSFSEQVP
LTGVILTRMDGDARGGAALSMRAVTGKPIKFAGMGEKLDALEPFHPKRVAGRILGMGDVV
SLVEKAAAAIQEEDAEKMAARLAKGQFDMNDLRNQLAQMRRMGGLGALAGMMPGMKKAQA
AVDQVGGDKVLIRMDAMITSMTPKERAKPDLINAKRKIRIAKGSGTTVQDVNKLLKMHME
MQTAMKRLKKMGGLKGMLGMLGKGGPGGGMGGIGNALGGAGLGDMMGKLDGPGGGLPGLG
GPGAPQLPPGFENLLKKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaagtctgagcgaacggctgggtggcgtattcgatcgcctgcgtggtcgtggc
gcgctgaccgaagccgatgtccgcaccgccatgcgcgaagtgcggatcgccctgctggag
gccgatgtcgcgcttccggtggcgcgcgacttcgtcgagaaggcgaccgaacaggcgatc
ggccacgaagtgctccgctcggtcacgccgggccagcaggtggtcaagatcgtccacgac
acgctcgtggacatgctcggtccggacacggccgagctcaacatcgccgtcactccgccc
gccgtcatcatgctcgtgggtctccagggctcgggcaagacgaccaccaccgccaagctg
tccaggctgctcaagagccagggcaagaaggtgatgatggcgtcgctggacgtgaaccgt
ccggccgcgcaggagcagctcgcggtgctgggtacccagaccgaggtatcgacgctgccg
atcgtcgccggccagcagccggtcgagatcgccaggcgtgcgctcaatgccgccaagctc
cagggctatgacgtcctgatgctcgataccgccggccgactgcacgtcgaccaggcgctg
atggacgagatgaaggcggtggcggacatcgccacgccgaacgagatcctgctcgtcgtc
gactcgctcaccggtcaggacgccgtgaacgtcgcatcgagcttctccgagcaggtgccg
ctcaccggcgtgatcctaacccgcatggacggcgatgcccgtggcggcgcggcgctgtcg
atgcgcgcggtcaccggcaagccgatcaagttcgccggcatgggcgagaagctcgacgcg
ctcgagcccttccatcccaagcgcgttgccggccgcatcctcggcatgggcgacgtcgtc
agcctcgtcgagaaggcggcggctgcgatccaggaggaagacgccgagaagatggcggcg
cggctggccaagggccagttcgacatgaacgacctgcgcaaccagcttgcccagatgcgc
cgcatgggcggcctgggtgcgctcgccggcatgatgccgggcatgaagaaggcgcaggca
gcggtcgaccaggtcggcggcgacaaggtgctgatccgcatggacgcgatgatcacctcg
atgacgccgaaggagcgcgccaagccggacctgatcaacgccaagcgcaagatccgcatc
gccaagggttcggggacgaccgtgcaggacgtcaacaaactcctgaagatgcatatggaa
atgcagaccgcgatgaagcggctgaagaagatgggcggcctgaagggcatgctgggcatg
ctcggcaagggtggccccggcggcggcatgggcggcatcggcaacgcgctgggtggcgcc
gggctgggcgacatgatgggcaagctggatggccccggcggcgggcttccgggccttggt
ggccccggcgcaccgcagctcccgcccggtttcgagaatttgctcaagaagaagtga
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