Sphingomonas sp. NIBR02145: O3305_01980
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Entry
O3305_01980 CDS
T10953
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spnb03000
]
O3305_01980 (soxR)
Transcription factors [BR:
spnb03000
]
Prokaryotic type
Helix-turn-helix
MerR family
O3305_01980 (soxR)
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Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_24
HTH_17
HTH_IclR
DUF2205
HTH_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WHU03398
LinkDB
All DBs
Position
402196..402663
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AA seq
155 aa
AA seq
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MRGNELLTIGELAARTGIAVSAVRFYEGKGIVHPIRTSGNQRRFLRSDIRRISFALIAQQ
LGLTLPQIAEELGKLPEGRTPTSADWARISRGIRKRIEVQIAQLQRTLDDLDGCIGCGCL
SLKKCALYNPDDRAARNGAGPRFILVSRKVALGLD
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgggaacgaactgctgacgatcggtgaactggcggcacggaccggaatcgcggtg
tcggcggtgcgcttctacgaggggaaggggatcgtccacccgatccgcaccagcggcaac
cagcggcggttcctgcgatcggacatccgccgcatctccttcgcgctgatcgcccagcag
ctcggcctcaccttgccgcagatcgccgaggagctgggcaagctgcccgaggggcgcacg
cccaccagtgcggattgggcgcggatcagccgcggcattcgcaagcggatcgaagtgcag
atcgcccagctccagcgtacgctcgacgatctcgacggctgcatcggttgcggctgcctg
agcctgaagaaatgtgcgctctacaatcccgacgaccgcgccgcgcgcaacggcgcaggc
ccgcgcttcatcctggtctcgcgcaaggtagcgctcggcctggattga
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