Sphingomonas sp. NIBR02145: O3305_03900
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Entry
O3305_03900 CDS
T10953
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spnb02000
]
O3305_03900
Transporters [BR:
spnb02000
]
Other transporters
Pores ion channels [TC:
1
]
O3305_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
WHU03752
LinkDB
All DBs
Position
845299..847530
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AA seq
743 aa
AA seq
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MSVRSRLSLLSLPLLALTVAMPHVAFAQQAEPQKDAEDSEEIVVTAARTVLPPNALPLTI
DVIDKQRLDQQIAISGSVTDAVANLTPSFSPTRQKLSGAGETLRGRSPLYAINGIPQSTP
MRDGSRDGFTIDGFFVDRVELIYGSNALQGIGGTGGIVNQVTVGAPKTEGISGRVLLQGT
ADNDFSKDGLGGKAAGLVQWKSGRFDATFGAAYEKRGVFYDGDGRRVGLNLTQGETQDSK
TVSLFSRLGYQVGETGRIDLIASRFELKGDGDYIAVVGNRATGLPTSATRGDAPGKAAAS
RTESVALTYTDTSLGGGNFVGQIFFNRTHDTFGGEILPIATFQDPTLDPTEKLFDQSENR
SRKLGAKLSYERAVPGFEALTATIGFDALVDKTEQRLIATNRVWVPPSDFRSLAPFVQGN
LKLFGGKLRLAGGARYENVEIKIDDYHTLASTTYVAPNKATYGGVAVSGGKPKFEDLLFN
GGVIVEPVTGIRAYASYAEGFTVPDTGRITRAIRVTGVDLDNYLDISPIVSNNREIGVEV
KRGPLDGSVTYFWSSSDKGQLLIARAAGIFDVQRQRVEIQGLEVNLGVKLPVPGLKASVG
YAHLSGRYDADTVPDGKVDTDLDGTNISPDRVNLAADYQKGPFSARVQAQFYLSRHFNGK
ARAIDDANPLHPQKLYMNDFGGYVLTDAYVRYQTKLGGLSLSVANLFDKMYIDYASDTRL
PNDNTVFYAGRGRTFTLSWDYRF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgcgttcgcgcctctcgctgctttccctgccgttgctggcgctcaccgtcgcg
atgccgcacgtcgcgttcgcccagcaggccgaaccgcagaaggacgccgaggatagcgaa
gagatcgtggtcaccgccgcacgcacggtgctgccgccgaatgcgctgccgcttacgatc
gatgtgatcgacaagcagcggctcgatcagcagatcgcgatctcgggctcggtgaccgat
gcggtggcgaacctgaccccgtccttctcgccgacccgccagaagctgtcgggcgcgggc
gagacgctgcgcgggcgctcgccgctctatgcgatcaacggcattccgcaatcgaccccg
atgcgcgatggcagccgcgacggcttcacgatcgatggcttcttcgtcgatcgggtcgag
ctgatctacggctcgaacgcgctgcaggggattggcggcaccggcggtatcgtcaaccag
gtgacggtgggtgcgccgaagaccgaagggatcagcgggcgcgtgctgctgcagggcacg
gcggacaacgactttagcaaggacgggctgggcggcaaggcggccgggctggtgcagtgg
aagtcgggccggttcgatgcgaccttcggtgcggcatatgagaagcgcggcgtgttctat
gatggggacgggcgccgcgtcggcctgaacctgacccagggcgaaacgcaggattccaag
acggtctcgctgttttcgcgacttggctatcaggtgggcgaaaccgggcggatcgacctg
atcgccagccgtttcgagctgaagggtgatggcgattatatcgcggtggtgggcaaccgt
gccaccggcctgccgaccagcgcgacgcgcggcgatgcgccgggcaaggccgcggcgagc
cgcaccgagagcgtagccctgacctataccgacacgtcgctgggcggcggcaatttcgtc
ggccagatcttcttcaaccgcacgcacgacacgttcggcggagagatcctgccgatcgcg
acgttccaggatccgacgctcgacccgaccgaaaagctgttcgaccagtccgagaaccgt
tcgcgcaagctgggcgccaagctgagctatgagcgcgcggtgccgggcttcgaggcgctg
accgcgaccatcggcttcgacgcgctggtcgacaagaccgagcagcggctgatcgcgacc
aatcgcgtctgggtgccgcccagcgatttccgcagcctcgcgccgttcgtgcagggcaat
ctgaagctgttcggtggcaagctgcgcctggcaggcggcgcgcgctacgagaacgtcgaa
atcaagatcgacgattaccacacgctcgcctcgaccacctatgtcgcgccgaacaaggcg
acctatggcggcgttgcggtctccggcggcaagccgaagttcgaggacctgctgttcaac
ggaggcgtgatcgtcgagccggttaccggcatccgcgcctacgcgagctatgccgagggc
ttcaccgtgcccgacaccggccgcatcacccgggcgatccgggtgaccggcgtcgacctc
gacaattatctcgacatctcgccgatcgtctcgaacaaccgcgagatcggcgtggaagtg
aagcgcgggccgctcgatggctccgtcacctatttctggtcatcgagcgacaagggccag
ttgctgatcgcgcgcgccgccggcatcttcgacgtgcagcgccaacgggtggagatccag
gggctcgaggtcaatctgggcgtgaagctgccggtgccggggctcaaggcgagcgtcggc
tatgcgcatctgagcggccgttatgacgccgacacggtgccggacggcaaggtcgatacc
gatctcgacggcaccaacatctcgccggaccgcgtcaacctggcggcggactatcagaag
ggtccgttcagcgcccgtgtgcaggcccagttctacctctcgcgccacttcaacggcaag
gcgcgggcgatcgacgatgccaacccgctgcatccgcagaagctctacatgaacgacttt
ggcggctatgtgctgaccgacgcatatgtccgctaccagacgaagctgggcgggctgagc
ctcagcgtcgccaacctgttcgacaagatgtacatcgactacgcctctgacactcgcctg
ccgaacgacaacaccgtcttctatgcgggtcgcgggcgcaccttcaccctgagctgggac
tatcgcttctga
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