Sphingomonas sp. NIBR02145: O3305_04485
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Entry
O3305_04485 CDS
T10953
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
O3305_04485
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spnb01007
]
O3305_04485
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spnb03016
]
O3305_04485
Enzymes [BR:
spnb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
O3305_04485
Amino acid related enzymes [BR:
spnb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
O3305_04485
Transfer RNA biogenesis [BR:
spnb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
O3305_04485
Prokaryotic type
O3305_04485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
tRNA-synt_1f
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WHU03854
LinkDB
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Position
961266..963944
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AA seq
892 aa
AA seq
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MSELPKTFDPAELESRWYQHWEANGLFRPERDGADPWTLVNPPPNVTGSLHIGHALDNTL
QDILVRHARLKGKDARWVVGTDHAGIATQMVVERQMNLKQQKRTDFTREEFVAKVWEWKE
ESGGEITQQLRRLGCSMDWANERFTMDEGFSKAVLKVFVELHKQKLLYRDKRLVNWDPGL
GTAISDLEVETKDVKGSFWHLKYPLADGSGFIEVATTRPETMLADMAVAVHPTDERYAAL
VGKQVRLPITGRLIPIVTDEHADPELGSGAVKITPGHDFNDFEVGRRAGIEARDMLNMLD
TKARITQTSDGLIPDDLLGIDRFEARKLVVARLKEEGFLIPHVDKDGEEHDAEPRTIATP
FGDRSGDVIEPWLTDQWYVDAATLAKPAIEAVRSGATKVVPKSWEKTYFNWMENIQPWCV
SRQLWWGHQIPAWFDADGTAYVAETEAEAQAQAGEGVALTRDPDVLDTWFSSALWPFATM
GWPENPDPTLGGRYPNDVLISGFDILFFWDARMMMQGLQFMKAVPFRTLYLHGLVRAADG
QKMSKSKGNVVNPLGLIDNYGADALRFFMAAMESQGRDIKMDEKRIEGYRNFATKLWNAA
RFAQSNGISASTTIEAPEANLAVNRWIIAETVATVQALDLALADLRFDEAANTIYQFVWS
RFCDWYLELIKPVLQGEGAEGVEETRAVAGWVLDQILVMLHPFMPFITEELWSKMGPRDY
ELIVAKWPMADARALDPSAAQEIDWLIRLVSEIRAARTELNVPPGARLPVFVRDASGETT
ARLGRQEAALARLARVDQASGEVPAGGSLQIVVDEATFVVPLGDVVDIEAEKTRLAKAIA
AAEKERDGLAGRLNNPSFVEKAKPEAVEKARADHAEKAAEAERLSAALARLG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactccccaagaccttcgaccccgccgaactcgaatcccgctggtaccagcac
tgggaagccaatggcctgttccgccccgagcgggatggcgccgatccctggacgctggtc
aacccgccgcccaacgtgaccggtagcctgcatatcggccatgcgctcgacaatacgctg
caggacatcctggtccgccatgcccggctgaagggcaaggacgcgcgctgggtggtcggc
accgaccatgccggcatcgcgacccagatggtcgtcgaacgccagatgaacctcaagcag
cagaagcgcaccgacttcacgcgcgaagaattcgtcgccaaggtctgggagtggaaggaa
gagagcggcggcgagatcacgcagcagctccgccgcctcggctgctcgatggactgggcg
aacgagcgcttcaccatggacgagggcttctccaaggccgtcctcaaggtgttcgtcgag
ctgcacaagcagaagctgctctaccgcgacaagcgcctggtgaactgggacccgggcctc
ggcaccgcgatcagcgacctcgaggtcgagacgaaggacgtcaagggcagcttctggcac
ctgaaatacccgctcgccgacggatcgggtttcatcgaggtcgcgaccacgcgccccgag
acgatgctggccgacatggcggtggccgtgcacccgaccgacgagcgctacgccgcgctg
gtcggcaagcaggtccgcctgccgatcaccggtcgcctgatcccgatcgtcaccgacgag
catgccgatccggagctcggctcgggcgcggtaaagatcacgccggggcatgacttcaac
gacttcgaggtcggccgccgcgccgggatcgaggcgcgcgacatgctcaacatgctcgat
accaaggcccgcatcacccagacgtccgacgggctgatccccgacgacctgctcggcatc
gaccggttcgaggcgcgcaagctggtggtcgcgcggctgaaggaagaaggcttcctgatc
ccgcatgtcgacaaggacggcgaggagcatgacgccgaaccgcgcacgatcgcgacgccg
ttcggcgaccgctcgggcgacgtgatcgagccctggctgaccgaccaatggtatgtcgat
gccgcgacgctggccaagccggcgatcgaggccgtccgttcgggtgcgaccaaggtcgtg
cctaagagctgggaaaagacctatttcaactggatggagaacatccagccctggtgcgtc
tcgcgccagctctggtggggccaccagatcccggcctggttcgacgcagacggcaccgcc
tatgtcgcggagaccgaagcggaagcccaggcacaggcgggcgagggcgttgcgctcacc
cgcgatcccgacgtgctcgacacctggttctcctcggcgctctggcccttcgcgacgatg
ggctggccggagaaccctgatcccacgctcggcgggcgctatcccaatgacgtactgatc
tcgggcttcgacatcctgttcttctgggatgcccgcatgatgatgcagggcttgcagttc
atgaaggcagtgcccttcaggacgctgtacctgcacggcctggtccgcgcggcggacggg
cagaagatgtccaagtcgaagggcaacgtcgtcaatccgctcgggctgatcgacaattac
ggcgccgatgcgctgcgcttcttcatggcggcgatggaaagccagggccgcgacatcaag
atggatgagaagcggatcgagggctatcgcaacttcgcgaccaagctgtggaacgccgcg
cgcttcgcccagtcgaacggcatctcggcctcgaccacgatcgaggcgcccgaggcgaac
ctcgcggtcaaccgctggatcatcgccgagaccgtcgccaccgtgcaggcgctcgacctg
gcgctggccgacctgcgcttcgacgaagcggcgaacacgatctaccagttcgtctggagc
cgcttctgcgactggtatctcgagctcatcaagccggtgctgcagggtgagggtgcggaa
ggcgtcgaggagacccgcgcggtcgccggctgggtgctcgaccagatcctggtcatgctc
cacccgttcatgcccttcatcaccgaagagctatggtcgaagatgggcccgcgcgactat
gaactgatcgtcgccaagtggccgatggccgatgcccgtgcgctcgatccctcggccgcg
caggagattgactggctgatccggctcgtcagtgagatccgcgccgcccgtaccgaactg
aacgtgccgccaggtgctcgcctgccggtcttcgtgcgcgatgcctcgggtgaaaccacc
gcccggcttggtcgccaggaagcagcgctggcgcgtctggcgcgcgtcgatcaggcttcg
ggcgaggtgcctgccggcggttcgctgcagatcgtcgtcgacgaagcgaccttcgtggtg
ccgctcggcgacgtggtcgatatcgaagccgagaagacccgcctcgccaaggcgatcgcc
gcggcggagaaggagcgggacgggcttgccggtcgcctcaacaacccgagcttcgtcgag
aaggccaagcccgaggcagtcgagaaggcccgcgccgatcatgccgaaaaggcagccgag
gccgagcggctgagcgcggcgctggctcgtctcggttaa
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