Sphingomonas sp. NIBR02145: O3305_04565
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Entry
O3305_04565 CDS
T10953
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O3305_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spnb03019
]
O3305_04565
Messenger RNA biogenesis [BR:
spnb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
O3305_04565
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
DUF7161
Motif
Other DBs
NCBI-ProteinID:
WHU03869
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All DBs
Position
complement(978815..979294)
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AA seq
159 aa
AA seq
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MTDIASLPYRPCAGVMLLNRHGRVFVGQRLDSVVEAWQMPQGGIDPGEDALEAAWRELWE
ETGVARELAELVAEAPDELFYDLPEDLAGRIWKGKWRGQRQRWFLFRFLGEDGDVNIQTA
EPEFRAWRWAEPKDLPELIVPFKRALYKELLTVFGQHLV
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatcgcctcccttccctatcgcccctgtgcgggcgtgatgctgctcaatcgc
cacggccgggtgttcgtcggccagcggctcgattccgtggtcgaggcctggcagatgccg
cagggcgggatcgatcccggcgaggacgcgcttgaggcagcctggcgcgaactgtgggaa
gagaccggggtggcccgcgagcttgccgagctggtcgccgaggccccggacgagctgttc
tatgaccttcccgaggacctggccgggcggatctggaagggcaagtggcgcggccagcgc
cagcgctggttcctgttccgcttcctgggcgaggacggcgacgtcaacatccagaccgcc
gagcccgagttccgcgcctggcgctgggccgagccgaaagatctccccgagctgatcgtg
ccgttcaagcgggcgctatataaggaactgttgaccgtctttggacaacatctcgtctga
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