Sphingomonas sp. NIBR02145: O3305_04710
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Entry
O3305_04710 CDS
T10953
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb03420
Nucleotide excision repair
spnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O3305_04710
03430 Mismatch repair
O3305_04710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spnb03400
]
O3305_04710
Enzymes [BR:
spnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O3305_04710
DNA repair and recombination proteins [BR:
spnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O3305_04710
MMR (mismatch excision repair)
Other MMR factors
O3305_04710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WHU03898
LinkDB
All DBs
Position
complement(1009359..1011668)
Genome browser
AA seq
769 aa
AA seq
DB search
MTLPVETDNNAPYLSGLNPPQREAVLTSEGPVLVLAGAGTGKTAALTARLAHLLWTRRAF
PSEILAVTFTNKAAREMKERVGRLVGAAVEGMPWLGTFHAIGAKMLRRHAELVGLQSNFT
ILDTDDQLRLIKQLILAADLDEKRWPARQLAGLIDEWKNKGLTPAEIGAGESERYANGRG
AALYFLYQERLKALNACDFGDLLLHMLVILKTHRDVLESYQQRFRYILVDEYQDTNAVQY
LWLRLLAQERKNICCVGDDDQSIYSWRGALVENILKFEKDFPGAKVIKLEQNYRSTPHIL
AAASGVIANNSGRLGKTLWTDKDEGEKVKVLGVWDGPEEARRVGEEMEGLNRGGKSFDDM
AILVRAQHQTREFEDRFIAIGLPHRILGGQRFYERMEIRDAVAYLRVIAQPADDLAFERI
VNTPKRGLGDKALAKVHQYARAAQVPLTVAAARILDTDELTPQARRALGNLVGDMARWRS
MGNDLQHPDLARIVLDESGYTAMWQADRTAEAAGRLENLNELVRAMEEYETLGAFLEHVS
LVMDNETNADEPKVTIMTIHAAKGLEFDTVFLVGWEEGIFPSQRALDEGGNASLEEERRL
AYVAITRARRKAFILHAANRRIYGQWNSSIPSRFVAELPEAHIDSESTMTGGASLWQANW
SERSDPFADVSRGTGRGPGWQRAAGVDMKNPGGSFTSRTFNREPARVVESRASAVSFGAK
ARDDLSLGMRVFHQKFGYGVIAEIEGNKLEIDFEQAGRKRVMDSFVTVG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcccgtagagaccgacaataacgccccctatctgagcggcctgaacccgccc
cagcgcgaggcggtgctcacttccgaagggccggtgctcgtcctcgccggcgccggcacg
ggcaagaccgcggcgctcaccgcccgcctcgcccatctgctctggacgcggcgcgccttc
ccgtccgagatcctggcggtcaccttcaccaacaaggcggcacgcgagatgaaggagcgc
gtcggccgcctcgtcggcgctgcggtcgagggcatgccctggctcggcaccttccatgcg
atcggcgccaagatgctgcgccgccatgccgagctggtcgggctgcaatcgaacttcacc
atcctcgataccgacgaccagctccgcctgatcaagcagctgatcctcgccgccgatctc
gacgagaagcgctggcccgcccgccagctcgccgggctgatcgatgaatggaagaacaag
ggcctgacccccgccgagatcggcgccggcgagtccgagcgctatgccaatggccggggc
gccgcgctctactttctctatcaggagcggctgaaggcgctcaacgcctgcgacttcggc
gacctgctgctccacatgctggtgatcctcaagacccatcgcgacgtgctggagagctat
cagcagcgcttccgctacatcctggtcgacgaatatcaggacaccaacgccgtccagtat
ctctggctgcgactgctcgcccaggagcgcaagaacatctgctgcgtcggcgacgacgac
cagtcgatctattcgtggcgcggcgcgctggtggagaacatcctcaagttcgagaaggat
ttccccggcgccaaggtgatcaagctcgagcagaattaccgctcgacgccgcacatcctc
gcggcggccagtggcgtgatcgccaacaacagcggccgccttggcaagacgctctggacc
gacaaggacgagggcgagaaggtcaaggtgctcggcgtatgggacgggcccgaggaggcc
cgccgcgtcggcgaggagatggaaggcctcaatcgcggcggcaagtcattcgacgacatg
gcgatcctcgtccgtgcccagcaccagacccgcgagttcgaagaccggttcatcgcgatc
ggcctgccccaccgcatcctgggcggccagcgcttctacgagcgcatggagatccgcgac
gccgtcgcctatctccgcgtcatcgcccagccggccgacgacctcgccttcgagcgcatc
gtcaacacgcccaagcgcggcctgggcgacaaggcgctggcgaaggtccaccaatatgcc
cgcgcggcgcaggtgccgctcaccgtggcggcggcgcgcatcctcgataccgacgaactg
acgccccaggcccgccgcgcgctcggcaacctggtcggcgacatggcgcgctggcgctcc
atgggcaacgacctccagcacccggatcttgcccgcatcgtcctcgacgagagcggctat
accgcgatgtggcaggccgatcgcaccgccgaggccgccgggcgcctggagaacctcaac
gagctcgtccgcgcgatggaggagtatgagacactcggcgccttcctcgagcacgtctcg
cttgtcatggacaacgagaccaatgccgacgagcccaaggtgacgatcatgacgatccac
gccgccaagggcctggagttcgacacggtgttcctggtcggctgggaggaaggcatcttc
ccctcgcagcgcgcgctcgacgagggcggcaacgcgtcgctggaggaggaacgccgcctc
gcctatgtcgcgatcacccgcgcgcggcgaaaggccttcatcctccacgccgccaatcgc
cgcatctacggccaatggaactcgtcgatccccagccgcttcgtcgccgagctgcccgag
gcgcatatcgacagcgaaagcacgatgaccggcggcgcgagcctgtggcaggcgaactgg
agcgaacgcagcgaccccttcgcggatgtgtctcgcggaacgggaagaggcccgggctgg
cagcgcgccgcgggcgtggacatgaaaaaccccggcggcagcttcacctcccgcaccttc
aaccgcgaacccgcccgcgtggtggaaagccgtgcgtccgccgtgagcttcggcgccaag
gcgcgcgacgacctgtcgctgggcatgcgcgtgttccaccagaagttcggctacggcgtg
attgccgagatcgaaggcaacaagctggagatcgacttcgagcaggccgggcggaagcgg
gttatggatagttttgtgacggtggggtag
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