Sphingomonas sp. NIBR02145: O3305_04935
Help
Entry
O3305_04935 CDS
T10953
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
O3305_04935 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spnb01007
]
O3305_04935 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spnb03016
]
O3305_04935 (aspS)
03029 Mitochondrial biogenesis [BR:
spnb03029
]
O3305_04935 (aspS)
Enzymes [BR:
spnb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
O3305_04935 (aspS)
Amino acid related enzymes [BR:
spnb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
O3305_04935 (aspS)
Transfer RNA biogenesis [BR:
spnb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
O3305_04935 (aspS)
Prokaryotic type
Other AARSs
O3305_04935 (aspS)
Mitochondrial biogenesis [BR:
spnb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
O3305_04935 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
WHU03941
LinkDB
All DBs
Position
1049060..1050898
Genome browser
AA seq
612 aa
AA seq
DB search
MHAYRTHTCAQLRAEHVGQEVRLSGWVHRKRDHGDLVFIDLRDHYGITQIVTEVDGPAFQ
VIESLRSESVVTMTGKVVARSAEAVNPNLPTGEIEIRVTDAKIQSQAQELPLPVFGDAEY
PEEIRLRNRFLDLRREKVHKNIMLRSSVIASLRRRMIDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDFE
MSYVTQDDVFAAIEPVLHGVFEEFADWEGMGRSVSALPFKRIPYRESMLKYGNDKPDLRN
PLLITDVSEFFKGSGFGRFASIVEGGDVVRAIPAPNTHEKSRKFFDDMNSWAQSEGFPGL
GYATQKDGVFGGPIANNHGQEGMKAIAEAMGLGPNDGIFFAAGKEAQAAKLAGLARTRAA
EQLELIDKKRFEFCWIVDFPMFEYDEDAKKVDFSHNPFSMPQGELEALETKDPLDILAYQ
YDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYTQADVDTNFAGMINAFKFGAPPHGGSAP
GVDRIVMLLADEPNIREVIVFPMTQKAEDLMMQAPSYVSEKQLKELNIRLAPQVAADLAK
KGTDGIVDPSAG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacgcacacctgcgcccagctccgcgccgaacatgtcggccaggaa
gtccgcctttcgggctgggtccaccgcaagcgcgaccatggcgacctggtcttcatcgac
ctgcgcgaccattatggcatcacccagatcgtcaccgaagtggacggtccggccttccag
gtgatcgagtcgctgcgcagcgaatcggtcgtgacgatgaccggcaaggtcgtcgcccgc
tcggccgaggcggtgaacccgaacctgccgaccggtgaaatcgagatccgcgtcaccgac
gcgaagatccagagccaggcgcaggaactgccgctgccggtgttcggcgacgcagaatat
cccgaggaaatccgcctgcggaaccgcttcctcgatctgcgccgcgagaaggtccacaag
aacatcatgctgcgctcgagcgtcatcgcgtcgctgcgccgccggatgatcgaccagggc
ttcaccgagttccagacgccgatcctcaccgcgtcgagccccgagggcgcccgcgactat
ctcgtgcccagccgcgtccacccgggcaagttctacgcgctcccccaggcgccgcagatg
ttcaagcagctgctgatggtcgccggcttcgacaagtatttccagatcgcgccctgcttc
cgcgacgaggacgcccgcgccgatcgctcgcctggcgagttctaccagctcgatttcgag
atgagctacgtcacccaggacgacgtgttcgccgcgatcgagccggtgctgcacggcgtg
ttcgaggaattcgccgactgggaaggcatgggccgcagcgtctcggcgcttccgttcaag
cgcatcccgtaccgcgaatcgatgctgaagtacggcaacgacaagcccgacctgcgcaac
ccgctgctgatcaccgacgtgagcgagttcttcaagggctcgggcttcggccgcttcgcc
tcgatcgtcgagggcggcgatgtcgtccgcgccatcccggcgccgaacacgcatgagaag
agccgcaagttcttcgacgacatgaacagctgggcccagtcggaaggcttcccgggcctc
ggctatgccacccagaaggacggcgtgttcggcggcccgatcgccaacaaccacggccag
gaaggcatgaaggcgattgccgaggcgatgggcctcggtccgaacgacggcatcttcttc
gccgccggcaaggaagcccaggccgccaagctcgccggccttgcgcgcacccgcgccgct
gagcagctcgagctgatcgacaagaagcgcttcgaattctgctggatcgtcgacttcccg
atgttcgagtatgacgaggacgccaagaaggtcgatttcagccacaaccccttctcgatg
ccgcagggcgagctggaagcgctggagaccaaggacccgctcgacatcctggcgtaccag
tatgacatcgtctgcaacggcatcgagctgtcctcgggcgcgatccggaaccaccgtccg
gagatcatgtacaaggcgttcgagatcgccggctacacccaggccgatgtcgacaccaat
ttcgccggcatgatcaacgccttcaagttcggcgccccgccgcacggcggctcggccccg
ggcgtggaccgcatcgtcatgctgctcgccgacgagccgaacatccgcgaagtcatcgtc
ttcccgatgacgcagaaggccgaggacctgatgatgcaggccccgtcctatgtcagcgag
aagcagctcaaggagctcaacatccgcctggcgccgcaggtcgcggcagacctcgccaag
aagggcaccgacggcatcgtcgatccctcggcgggctga
DBGET
integrated database retrieval system
