Sphingomonas sp. NIBR02145: O3305_05405
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Entry
O3305_05405 CDS
T10953
Name
(GenBank) SDR family oxidoreductase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00520
Amino sugar and nucleotide sugar metabolism
spnb01100
Metabolic pathways
spnb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
O3305_05405
Enzymes [BR:
spnb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
O3305_05405
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
WHU04030
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Position
1150766..1151716
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AA seq
316 aa
AA seq
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MSGNIERVLVTGGAGFIGSHLVDRLIDRGAHVICLDNLLTGAMGNVAHLARHPRFEFLQR
DVCEPLDLQVDAIYNLACPASPVQYQRDPVRTTKTAVLGALNMLELARRNTCPILQASTS
EVYGDPLVHPQDESYSGNVNCTGPRSCYDEGKRCAETLFFDYRRQYGLAVKVARIFNTYG
PRMQRDDGRVVSNFITQALVGAPIQLYGNGSQTRSFCYVDDLVEGLLRLMATPDDFTGPV
NLGNAAEISISALAERVLSLTGSASPLQNSPLPTDDPRRRMPNLALAEQVLGWRAAMPLD
KGLMHTIDYFSRQPVA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaacatcgaacgcgtcctcgtgaccggaggcgccgggttcatcggttcgcac
cttgtcgatcggctgatcgatcgcggtgcccatgtcatctgcctggacaacctgctgacc
ggcgcgatgggcaatgtcgcgcatctcgcccggcatccgcgcttcgagttcctgcagcgc
gacgtctgcgagccgctcgatctccaggtcgatgcgatctacaacctcgcctgcccggca
tcgccggttcagtaccagcgcgatccggtacggacgaccaagaccgcggtgctcggcgcg
ctcaacatgctggaactggccaggcggaatacctgcccaattctccaggcctcgacgagc
gaggtctatggcgatccgctcgtccatccccaggacgaaagctacagcggcaatgtgaac
tgcaccgggcctcgctcctgctacgatgaaggcaagcggtgcgcggagacgctgttcttc
gactatcgccggcaatatggcctggccgtaaaggtagcgcggatcttcaatacctatggc
ccgcgcatgcaacgcgacgatggccgcgtggtcagcaacttcatcacccaggcgctcgtg
ggcgcgccgatccagctctatggcaatggcagccagacccggtccttctgctatgtcgac
gatctggtggaaggcctgttgcggctgatggcgacgcccgatgatttcaccgggccggtc
aatctcggcaatgccgccgagatctcgatcagcgcgctggcggagcgggtcttgtccctg
accggctcggcgtcgccgctgcagaactcgcccctgcccacggacgatccgcgccggcgc
atgccgaacctcgcgcttgccgagcaggtgctcggatggcgggcggccatgccgctcgac
aagggcctgatgcacaccatcgactatttctcgcgccagcccgtggcgtga
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