Sphingomonas sp. NIBR02145: O3305_08010
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Entry
O3305_08010 CDS
T10953
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00071
Fatty acid degradation
spnb00362
Benzoate degradation
spnb00650
Butanoate metabolism
spnb01100
Metabolic pathways
spnb01120
Microbial metabolism in diverse environments
spnb01200
Carbon metabolism
spnb01212
Fatty acid metabolism
Module
spnb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
O3305_08010
09103 Lipid metabolism
00071 Fatty acid degradation
O3305_08010
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
O3305_08010
Enzymes [BR:
spnb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
O3305_08010
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Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
Pyr_redox_2
Pyr_redox
F420_oxidored
FAD_binding_3
NAD_binding_7
TrkA_N
NAD_Gly3P_dh_N
GIDA
Motif
Other DBs
NCBI-ProteinID:
WHU04519
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All DBs
Position
complement(1784034..1786091)
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AA seq
685 aa
AA seq
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MQVEVERRDKVALLRFSNPPVNTQSVAGVGVIAAAFAALVTDPAVAAIVVSGGPKIFSAG
AQITEFDGDPSKIDANRAMIEAIEASPKPVVAAINGVCMGGGLELALACHYRVSAGNARI
GLTEVTLGVLPGGGGTQRLPRLIGAKAGLELMLSGRVLDGAQAKAAGVVDDVVTGDAEAA
ALALAELVPAVRRTGEMPAPGDLAEALAAARPRSLAQRRIVECVAAIGTHDFVAGLRVEA
DLFSELLGSEESRGLRHAFFGRRIAARVPGLGEAKPGKIGQVAVIGGGLMGTGIALALLN
AGLKIVLVEPRAEALDRARATIAKAILREVEKGRIGADVADARLAALTAASEIDAAAGAD
LLIEAVFEDMEVKRQVFEGMERVARTDAILASNTSTLDLDAIAGFTATPERVVGLHFFSP
ANVMKLLEVVRGAKTAPETLATAMAFGKAIGKSPVAVGVCDGFVGNRMFEEYLRQAWYLL
EEGALPGQLDGALKRWGMAMGPVAVMDLAGQDIGWSIRKRRAVDQPDRPYSKIPDLVCEL
GRFGQKTGAGFYRYPDGRTAEPDPEIDALILAESARLGIERREIGDEEIVERCIYALVNE
GAKILGERIAWRAVDIDVVYLDGYGFPGERGGPMYLADRIGLPRVLERIEQFAAGPQGWA
WAPAPLLVELAASGRTFASLDAATL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagtcgaggtcgaacggcgggacaaggttgcgctgctgcgcttctccaatccgccg
gtgaacacccagtcggttgccggggtgggggtgatcgccgcggcgtttgccgcgctggtg
acggacccggcagtggccgcgatcgtcgtcagcggcgggccgaagatcttcagtgcgggc
gcgcagatcaccgagttcgatggcgatccgtcgaagatcgacgccaatcgcgcgatgatc
gaggcgatcgaggcctcgcccaagcccgtggtcgcggcgatcaacggcgtctgcatgggc
ggcgggctcgaactggcgctggcctgccactatcgggtcagcgccggaaacgcccggatc
gggctgaccgaagtgacgctcggtgtgctgcccggcggcggcggtacccagcggctgccg
cgcctgatcggggcgaaggcagggctcgagctgatgctgagcgggcgtgtgctcgacggt
gcccaggccaaggcggcaggcgtggtcgatgatgtggtgacgggagatgccgaggcggcg
gcgctcgccctggcggagctggtgccggcggtgcgccgcaccggcgagatgccggcaccg
ggtgaccttgccgaggcactggccgctgccaggccgcgctcgctggcccagcggcggatc
gtcgaatgcgtagctgcgatcgggacgcatgatttcgtcgccggactgcgggtcgaggcg
gatctgttcagcgagctgctgggctcggaggagtcacgcggattgcggcacgccttcttt
ggccgccggattgccgcgcgcgtgcccgggctgggtgaggcgaaaccggggaagatcggg
caggtcgcggtgatcggcggcgggttgatgggcaccggcatcgcgttggcactgctcaat
gcggggctgaagatagtgctggtcgagccgcgtgccgaggcgctcgacagggctcgcgca
acgatcgccaaagccatcctgcgcgaggtcgagaaggggcggatcggggcggatgtcgcc
gatgcccgtctggctgccctcaccgccgcatcggagatcgatgcggctgccggtgccgac
ctgctgatcgaggcggtgttcgaggacatggaggtgaagcgccaggtgttcgagggcatg
gagcgggttgcccggacggacgcgatccttgcgagcaacacctcgacgctcgacctcgat
gcaatcgccggcttcacggccacgccggagcgggtggtggggctgcacttcttctcgccc
gccaatgtgatgaagctgctggaagtggtgcgcggcgcgaaaaccgcgcccgagacgctg
gcgacggcaatggcgttcggcaaggctatcggcaagagcccggtggcggtcggcgtttgc
gacgggttcgtcggcaaccggatgttcgaggaatatctccgccaggcctggtacctgctc
gaggaaggtgcgctgccgggccagctggacggtgcgctcaagcgctggggcatggcgatg
gggccggtcgcggtgatggacctggccgggcaggatatcggctggagcatccgcaagcgc
cgcgcggtggaccagcccgaccggccctattcgaagatccccgatctggtctgtgaactc
gggcggttcgggcagaagaccggggcgggcttctatcgctatccggatggacgcaccgcc
gagccagacccggagatcgacgcgctgatccttgctgaatccgcgcggctgggcatcgag
cggcgcgagatcggcgacgaagagatcgtcgagcgctgcatctatgccctggtcaatgaa
ggcgcgaaaatcctcggcgagaggatagcctggcgcgcggtcgatatcgatgtcgtctat
ctcgacggctatggcttccccggcgagcgcggcgggccgatgtatctcgccgaccggatc
ggcttgccccgggtgctggaacgcatcgaacaattcgccgccggtccgcagggctgggcc
tgggcgccggcgcctctgcttgtcgaactcgcggcttcggggcgcaccttcgcgtcgctc
gatgcggccactctctga
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