Sphingomonas sp. NIBR02145: O3305_08330
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Entry
O3305_08330 CDS
T10953
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00511
Other glycan degradation
spnb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
O3305_08330
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
O3305_08330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spnb04147
]
O3305_08330
Enzymes [BR:
spnb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
O3305_08330
Exosome [BR:
spnb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
O3305_08330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
Motif
Other DBs
NCBI-ProteinID:
WHU04581
LinkDB
All DBs
Position
complement(1873422..1875047)
Genome browser
AA seq
541 aa
AA seq
DB search
MSTRIMEKTRMISGKRIFGASVAMAALALAVPAAAQVPGYEAKVDAKLKQVKAGIAKGPF
KSDWDALRGKYRTPEWFRDAKFGIFIHWGPYSVPAFANEWYSRNMYVPGNAAYKHHVETY
GPQSRFGYKDFIPQFKAEKFDPTAWMKLFQDAGARYVVPVAEHCDGFAMYASDFTEWDAS
KMGPKRDTTGEIAKAARAAGLHFGLSSHRAEHWWWYYMGRTFDSDVNDPKNDGLYGPAAP
MGLPADRPESWPDGGQLQTWMPPNKAFLNDWMARTSELVDKYKPELIYFDWWTAAPSFEP
LMRDTAAYYYNRSAGWGQQGIIAYKGGQFAEGSALFDMERGKTDALKLTPWQSDTSVSVH
SWGYARNDSYRTAQSLISDLIDIVSKNGNLLLNVGPKADGTIPDEIAQVLQGMGGWLKVN
GEAIYGTRPFQFFGEGPTKSGQVRVGGQVEESAVKGYTPADIRFTTKGDNLYALGLERPK
DGAVLIKTLYAGTPYLTAPIKSIALLDGGKVEWEQTPKGLRITLPAVGDGAYPYALRIRT
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccaggatcatggagaagaccaggatgatatcgggcaagcgcatttttggcgcg
tcggtggcgatggccgcgctggcgctggccgtaccggcggcggcacaggtgccgggctat
gaagccaaggtcgatgccaagctgaagcaggtcaaggcggggatcgcgaaggggccgttc
aagtcggactgggacgcgctgcgcggcaagtatcgcacgcccgaatggttccgcgatgcc
aagttcggcatcttcatccattgggggccgtactcggtcccggcgttcgccaatgaatgg
tattcgcgcaacatgtatgtgcccggcaacgctgcgtacaagcatcatgtcgagacctac
ggcccccagtccaggttcggctacaaggacttcattccgcagttcaaggcggagaagttc
gaccccaccgcctggatgaagctcttccaggacgccggagccagatatgtcgtgccggtc
gccgagcattgcgacggcttcgcgatgtatgcgtcggacttcaccgaatgggatgcctcc
aagatggggccgaagcgcgacaccaccggcgagattgccaaggccgcgcgtgcggcgggc
ctgcatttcggcctgtcctcgcatcgcgccgagcattggtggtggtactatatgggccgc
accttcgattccgacgtgaacgatccgaagaatgacggcctgtacgggccggcggcgccg
atgggcctgccggccgacaggcccgagagttggcccgatggtggccagctgcagacctgg
atgccgcccaacaaggcgttcctcaatgactggatggcgcgcacctcggagctggtcgac
aagtacaagccggagctgatctattttgactggtggaccgcggcgcccagcttcgaaccg
ctgatgcgcgataccgcagcctattattacaaccgctcggcgggctggggtcagcagggc
atcatcgcgtacaagggcgggcagttcgccgagggcagcgcgctgttcgacatggagcgc
ggcaagaccgacgcgctcaagctgacgccctggcagtccgatacctcggtgagcgtccat
agctggggctatgccaggaacgacagttaccgcacggcgcagtcgctgatctccgacctg
atcgacatcgtcagcaagaacggcaatctgctgctcaatgtcggccccaaggccgatggg
acgatccccgacgagatcgcccaggtgctacagggcatgggcggctggctcaaggtgaac
ggcgaagcgatctacggcacgcgcccgttccagttcttcggtgaggggccgaccaagtcg
ggtcaggtgcgcgtgggcggccaggtcgaggaatcggcggtgaagggctacacgcccgcc
gacatccgcttcaccaccaagggcgacaatctctacgcgctggggctcgagcggccgaag
gacggcgcggtgctgatcaagacgctctatgccggcacgccctatctgacggcgccgatc
aagagcatcgcgctgctcgacggcggcaaggtcgaatgggagcagacccccaaggggctg
cgcatcacgctgccggcggttggcgacggggcctatccctacgccctccgcatccgcacg
cgctga
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