Sphingomonas sp. NIBR02145: O3305_08680
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Entry
O3305_08680 CDS
T10953
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spnb02000
]
O3305_08680
Transporters [BR:
spnb02000
]
Other transporters
Pores ion channels [TC:
1
]
O3305_08680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Talin_R4
Motif
Other DBs
NCBI-ProteinID:
WHU04647
LinkDB
All DBs
Position
complement(1960806..1963358)
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AA seq
850 aa
AA seq
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MTDVAAAQEATTTSEPAGEIVVIGTRRTDRTLTTSASPVDVISAAELTAQPAANMIDAVK
NVVPSFYAGQNSISDASTFVRSPSLRGLPGDQVLVMLNGKRYNRSALVQVYAGSDTGLGR
GSQGPDISAIPSLAISNLQVLREGATAQYGSDAIAGVLNYGLKEGSGFEVVARAGQYYAG
DGESYQIAGNIGLAGAIGFINLTGEYDDDAQTSRGVTRPSAANFAINFPSLASQLPNYPL
PAQIWGTSPSHGYKLLLNSALNVTDESKLYFFANFAKIHANQSFNYRPSVTSTAVDSAGV
VRTQGANALFNNTFYLTPCPTGNATCPAGSFVVDSNVFRFSQLYPAGFTPRFVGETEEIY
GTLGYKGETESGFRYDLSGSWARNTLTLSMYSSLNASYGPRTQTSFAFGKLIQEEANLNA
DFSYPVDIGLASPLTFSAGGEFRKETYEQTAGDVQSYGAGPYAVAQRLYTQTAPGVYTFT
GTSNAQGVGASGYAGTSPAAAGRFSQKSYGAYIDLETDITDALSVGAAGRYEHYDTFGDA
WVWKINGIYKFADAFSVRGSIGTGFHAPSPGQSNDAIITTSFVAGTAVQVGTYPVNTAIA
QYYGATTLDPEKSTNYGVGFILTPDKDLSFTVDAYQIDVKNRIGITQNYTVTAADVAAQP
SLIAVGVGGQVNFFTNGFDTRTRGIDVVGTWKTVLSEAELNFSLAYNYNKSEITKYNPKV
IGPNQIIDAEHLAPNHRVVFVASWSLDGLSFNVRENYYGSWKSAQDYGPGQTFGDKFVTD
LDVSYTFAEHYTITIGAQNFTDERPDRLTAASVPIYPITGGTSDGQVYPRNGGPFGFNGG
FYYARLRIKY
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatgtcgcggcggctcaggaagcgacaactacgtccgagccggccggcgagatc
gtcgtcatcggcacgcgacgtaccgatcgcacgctcacaacctccgcgtctccggtagac
gtgatcagtgccgccgagcttaccgcacagcccgccgcgaacatgatcgatgcggtgaag
aacgtcgtgccgtccttctatgccggccagaactcgatttcggacgcgtccaccttcgtg
cgctcgccgtcactgcgcggcctgccgggcgaccaggtgctcgtgatgctcaacggcaag
cgctacaatcgctcggcgctggtccaggtctatgccggcagcgacaccggcctcgggcgc
ggctcgcaggggccggacatctccgccatcccgtcgctggcgatcagcaacctccaggtg
ctgcgcgagggtgcgacggcgcaatatggttcagacgcgattgctggcgtgctcaactat
ggcctgaaggagggaagcggcttcgaggtcgtggcgcgggccggccaatattatgcaggc
gatggagagagttaccagatcgccggcaatatcggccttgccggggcaatcggtttcatc
aacctgaccggcgaatatgacgacgatgcgcagaccagccgcggcgtcacccggccatcc
gccgcgaactttgcgatcaacttcccttcactggcgtcgcaattgcccaactatccgctg
cccgcgcagatctggggcacctcgccatcccatggttacaagctcttgctcaattcggcg
ctgaacgtgaccgatgagagcaagctctacttcttcgccaactttgcaaagatccacgca
aaccagagtttcaactaccgcccctcggttaccagcaccgccgtcgattccgccggcgtg
gtccgcacccagggcgccaacgcgctgttcaacaacactttctaccttacgccatgcccc
accggcaacgcgacctgcccggcgggcagcttcgtggtcgacagcaatgtcttccggttc
agccagctctatccggccggtttcaccccgcgcttcgtcggcgagaccgaggagatctac
ggcacgctcggctacaagggcgagaccgagagcggcttccgctatgacctgtccggctcc
tgggcccgcaacacgctgaccctgtcgatgtacagctcgctcaacgcctcctacggcccc
aggacccagaccagcttcgccttcggcaagctgatccaggaggaggccaatctcaacgcg
gacttcagctatccggtggatatcggcctggcgagcccgctgaccttctccgccggcggc
gaattccgcaaggagacctatgagcagaccgccggcgacgtgcagtcctatggcgctggt
ccctatgcggtggcgcagcggctctacacccagaccgcgcccggcgtgtataccttcacc
ggcaccagcaacgcccagggcgtcggcgcgagcggctatgccggcaccagcccggcggcg
gccggacggttcagccagaaaagctatggcgcctatatcgatctcgagaccgacatcacc
gacgcgctgagcgtcggcgccgccggccgctacgagcattacgacacgttcggcgatgcc
tgggtgtggaagatcaacggcatctacaagttcgccgatgccttctcggtgcgcggcagc
atcggcaccggcttccacgcgccgtcgccaggccagtcgaacgatgcgatcatcaccacc
tcgttcgtcgcgggcaccgcggtgcaggtcggcacctatccggtgaacaccgcgatcgcc
caatattatggcgcgacgacgctcgatccggagaagtcgaccaactacggcgtgggtttc
atcctgacgccggacaaggacttgtcgttcaccgtcgatgcctatcagatcgacgtgaag
aaccggatcggcatcacccagaactacaccgtcaccgcggccgacgtggcggcgcagcca
tcgctgatcgcggtgggcgtgggcggccaggtcaacttcttcaccaacggcttcgacacc
cgcacccgcggcatcgacgtggtcggcacctggaagaccgtgctcagcgaggcggagctc
aatttctcgctcgcctacaactacaacaagagcgagatcaccaagtacaatcccaaggtg
atcggcccgaaccagatcatcgacgccgagcatctcgcacccaaccaccgcgtggtgttc
gtcgccagctggtcgctcgacgggctgagcttcaacgtgcgcgagaattattacggcagc
tggaagagcgcccaggactatggcccgggccagaccttcggcgacaagttcgtcaccgat
ctcgacgtcagctacaccttcgccgagcactacacgatcaccatcggcgcgcagaacttc
accgatgagcgcccggaccggctgaccgcggcatcggtgccgatctacccgatcaccggc
ggaacgtccgacggccaggtctatccgcgcaacggcggccccttcggcttcaatggcggc
ttctactacgcccggctgcgcatcaaatactga
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