Sphingomonas sp. NIBR02145: O3305_09520
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Entry
O3305_09520 CDS
T10953
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00520
Amino sugar and nucleotide sugar metabolism
spnb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
O3305_09520
Enzymes [BR:
spnb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
O3305_09520
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
WHU04807
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Position
complement(2150236..2151900)
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AA seq
554 aa
AA seq
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MNRFLTTAAALLLTAPAIAQPVATFSSFTYSGRDASDALTAGPNDYRNPILKGFYPDPSV
TRVGDDFYLVTSTFGWYPGIPVFHSRDLVHWTQIGNAIDRPGQLDFKQLGLSRGVFAPSI
QAKDGIFYLLNTCVDCGGNFLLTAKNPAGPWSDPVWLPDLEGGIDPSMFFDDDGRTWVVN
NGPTRGQPLYQGHRAIWVQEFDRKTSKTFGPRTLLVDGGIDISKKPVWIEGPHIFKKDGW
YYLSCAEGGTAEGHSQVILRSKSVTGPYEAWSGNPILTQRDLPRDRPMPITSAGHAQLVT
TPDGKWWATFLAVRPYEGDFYSTGRETFLLPVEWKDGWPVILPAATPIPWTHAKPALPQS
KAPILTSGAFTIRDDFRGKLPAYWMMLRNPREDWYRTGAAGLMLKARAAGLGDNANPSFL
ARRQQHTNAVAETTVKFAPEKDGDRAGLAVLQNDDYWFFVGVKRVGGKAVLTLDQREGPD
SPKLGKTLATVPAPAGPVRLRIAVQGRSYAFSYAAPGAKPAWKHLGKVETDSLTTKVAGG
FVGSVFGVFAGRGE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgattcctgaccaccgccgccgcgctgctcctcaccgcgcccgccatcgcccag
cccgtcgcgaccttttccagcttcacctatagcggcagggacgcgtccgacgcgctcacc
gccgggccgaacgactatcgcaacccgatcctcaagggcttctatccggatccgagcgtc
acccgggtcggcgacgacttctacctcgtcacctccaccttcggctggtaccccggcatc
ccggtcttccacagccgcgacctggtccactggacccagatcggcaacgcgatcgaccgg
ccgggccagctcgacttcaagcagctcggcctgtcgcgcggcgtcttcgcgccgtcgatc
caggcgaaggacggcattttctacctgctcaacacctgcgtcgattgcggcggcaatttc
ctgctgaccgcgaagaaccccgccggcccgtggagcgacccggtctggctgcccgatctc
gagggtggcatcgatccctcgatgttcttcgatgacgacgggcgcacctgggtggtcaat
aacggccccacccgtggtcagccgctctaccagggtcaccgcgcgatctgggtccaggag
ttcgatcgcaagaccagcaagaccttcggtccgcgcacgctgctggtcgacggcggcatc
gacatctcgaagaagcccgtctggatcgagggaccgcacatcttcaagaaggacggctgg
tattatctcagctgcgccgagggcggcaccgccgagggccatagccaggtgatcctgcgc
tccaaatcggtcaccggcccttacgaggcgtggagcggcaacccgatcctcacccagcgt
gatctgccgcgcgaccggccgatgccgatcacctcggccggccacgcccagctcgtcacc
accccggacggcaaatggtgggccaccttcctcgccgtgcgcccgtacgagggcgatttc
tactccaccggccgcgagaccttcctgctgccggtcgagtggaaagacggctggccggtc
atcctgcccgccgccaccccgatcccctggacgcacgccaagccggcgctgccccaaagc
aaggcgccgatcctcacgtctggcgccttcaccatccgcgacgatttccgcggcaagctc
ccggcttattggatgatgctccgcaacccgcgcgaggactggtaccgcaccggcgccgcc
ggcctgatgctcaaggcgcgcgccgccggcctcggcgacaacgccaacccgtcgttcctc
gcccgccgccagcagcacaccaacgcggtggccgaaaccacggtgaagttcgcgcccgaa
aaggacggcgaccgcgccgggctcgcggtgctgcagaacgacgactattggttcttcgtc
ggggtgaagcgggtagggggcaaggccgtcctcaccctggaccagcgcgaagggccggat
agcccgaagctcggcaagaccctggccaccgtgcccgcgcccgccggcccggtgcggctg
cgcatcgccgtgcagggccgcagctacgccttcagctatgccgcgcccggcgcgaagccc
gcctggaagcatctcggcaaggtcgagaccgacagcctcacgaccaaggtcgccggcggt
ttcgtcggctcggtgttcggcgtgttcgcggggcgaggggagtga
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