Sphingomonas sp. NIBR02145: O3305_09710
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Entry
O3305_09710 CDS
T10953
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spnb02000
]
O3305_09710
Transporters [BR:
spnb02000
]
Other transporters
Pores ion channels [TC:
1
]
O3305_09710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WHU04842
LinkDB
All DBs
Position
2203231..2205513
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AA seq
760 aa
AA seq
DB search
MSSCRRTRIAALPLFCIAGPALAQEAQDEPSILVVGQKDAPISIDPRGLSVSMGEAQFAG
VNAQNVEDLMKYAPDFFVRKRYAGDSNGVPGFRGTHSMQSARALVMVDGFVVSNFLGNSF
AFSPKWGVVGPGEVDQFDVVYGPYSARYSGNSMGGIVNITTRSPEKTEAFATVQGLTEPY
DQYGTHATYWGWSGEAGLGWRQKDGPWSARLSGRHFRNDGQPMSWYGLTPATGAPGTVVT
GAIVDTGQAIPNSPGRPTSPIFAAQSPARTTQDQAKLRIGYDGTSGITGEALLAYWHNVD
AQYAPDCYLRDSTGNKVCEGRVTTLGQSWTASGARWSRTVRDEFLAGAKLAAPIAPDVTA
KLNVSTYQIARSDGFTSASWTAGANNGAGTLARQGPTGWYTAELSVDGRTGAFELAGGAS
ANLYQTDQTNYTLPVWRGDGGRAFSTRTHGKTRLLAGWAEGRLRAEALVFTLGARLENWR
AFDGGLGRLGTGGVPVTNSYAARSDTAFDPKFSVEWHGQATSVQLSLAEATRFPTVGELF
QGSLNGDGSFNPNSFDPNLKPERSRDANLLVAHDFGGLKLTGSAFWQRVEDTIFAFTGFN
QNGITTSSFKNIDTTRQVGLELIAEARDVGVAGLDIDANAAWIDSKTVRNDSAPAAEGVQ
FPRIPRWRLNANIRYQVTPRVLASLGMRYATRPNTDLFGTQRGDTFGYTSELFALDAKVN
WKMTDNFRLSAGVDNITNNKAWVYHPYPQRSVLVEAGWTL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttgtcgtcgcacgcgcatcgccgcgctgccgctgttctgcattgccggtccc
gccctcgcccaggaggcgcaggacgaaccttccatcctcgtggtcggtcagaaggacgca
ccgatcagcatcgatccgcgcgggctctcggtgagcatgggcgaggcgcagttcgccggc
gtcaacgcacagaatgtcgaggacctgatgaaatacgcgcccgatttcttcgtgcgcaaa
cgctatgccggggactcgaacggcgtgccgggctttcgcggcacccattcgatgcagagc
gcccgcgcgctggtgatggtcgacgggttcgtggtgtcgaacttcctcggcaacagcttc
gccttctcgcccaaatggggggtggtcggccccggcgaggtcgaccagtttgacgtggtg
tatggcccctattcggcgcgctactcgggcaattcgatgggcggcatcgtcaacatcacc
acccgctcgccggagaaaaccgaagccttcgcgaccgtacaggggctgaccgagccctat
gaccagtacggcacccacgcgacctattggggctggtcgggcgaggccggcctgggctgg
cggcagaaggacgggccgtggtcggcacggctctccgggcgccatttccgcaacgatggc
cagccgatgagctggtatggtctcaccccggcaaccggcgcccccggcaccgtggtgacc
ggcgcgatcgtcgatacgggccaggcgatccccaattcgcccggccggccgaccagcccg
atcttcgcggcgcagagcccggcgcggacgacgcaggaccaggccaaactgcgcatcggc
tatgacggcacctcgggcatcaccggcgaagcgctgctggcctattggcacaatgtcgac
gcgcaatatgcgcccgactgctatctgcgcgactccaccggcaacaaggtttgcgaaggc
agggtgaccacgctcggccagagctggacggcgtccggcgcgcgctggtcgcgcacggtg
cgcgacgagttcctcgccggcgccaagctcgccgccccgatcgcgccggacgtgaccgcg
aagctcaacgtctcgacctaccagatcgcccgctcggacggcttcacttcggcaagctgg
acggcgggtgcgaacaatggcgcgggcacgctggcgcgccaggggccgaccggctggtac
accgccgagctttcggtcgacggccgcaccggcgcgttcgagcttgcgggcggcgccagc
gccaatctctaccagaccgaccagaccaactacacattgccggtgtggcgcggcgatggc
ggccgcgccttctccacccgcacccatggcaagacccggctgctcgccggctgggccgag
gggcggctacgcgctgaggcgctggtcttcaccctcggcgcgcggctggagaactggcgg
gcgttcgacggcgggcttgggcggctcggaactggcggggtcccggtcaccaatagctat
gccgcgcgcagcgacaccgcgttcgatccgaaattctctgtcgaatggcatgggcaggcg
accagcgtgcagctcagcctggccgaggcgacgcgcttcccgacggtgggcgagctgttc
cagggcagcctcaatggcgatggcagcttcaacccgaacagcttcgatccgaacctcaag
cccgagcgctcgcgcgacgccaacctgctcgtcgcgcatgacttcggcgggctgaagctc
accggctcggccttctggcagcgggttgaggacacgatcttcgcgttcaccggcttcaac
cagaacgggatcaccacctcgagcttcaagaatatcgacacgacccgccaagtcggactc
gagctgatcgccgaggcacgcgatgtcggcgtggccggcctggatatcgacgccaatgcc
gcctggatcgactcgaagaccgtgcgcaacgacagcgcgccggcggccgagggcgtgcag
ttcccgcgcatcccgcgctggcggctcaacgctaacatccgctatcaggtgaccccgcgc
gtgctggcctcgctcggcatgcgctatgctacccggcccaataccgaccttttcggcacc
cagcgcggcgacacgttcggctatacctcggagctgttcgcgctcgatgccaaggtgaac
tggaagatgaccgacaatttccggctgagcgcaggcgtggacaatatcaccaacaacaag
gcgtgggtgtatcacccctatccccagcgcagcgtcctggtcgaagcggggtggacgctg
tga
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