Sphingomonas sp. NIBR02145: O3305_09855
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Entry
O3305_09855 CDS
T10953
Name
(GenBank) TonB-dependent receptor
Organism
spnb Sphingomonas sp. NIBR02145
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Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl_3
MtrB_PioB
Motif
Other DBs
NCBI-ProteinID:
WHU04866
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Position
2237293..2239899
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AA seq
868 aa
AA seq
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MTQTRMKLLAGAALAVLAPAAHAQTQAPPRQDNPAPKQGEDDIVVTGKAPPGSVIGDIPP
ENRLGQADIAAYGVGTVSELLDAIAEQTASAQGRDDEGPVVLVNGKRISGVNEVSDLPTE
SIVRVDILPEEVALKYGYDAQRKVVNIILRRRFEGRVANLAGGLATEGQGENGSGDFTYT
RIRDNDRVNIAGRAKSTASLLESERDLVPASTAADGTDDRGYRTLKPATRSYGLNANVAH
QLGAKTNLSVNLRGDYTSSDGLNGLPLGTTSFLSDDPLRQDSRTTTVGGGVTLNHDLSRR
WRLSAVASYSHADTRRDTDRADSGMIGTDRASSLTDTGNASLLVNGKLLALPAGDAAVSV
RLGGDFSSLSTRSTLGGTATSGDSSRTNAGGQISLDLPLASRAKGVLPFLGKLTANLNGG
VTQVSDYGTLGTFGYGLNWTPVTGLSLIAAVNEDRVAPTLAQRGDAVVITDNVRAYDYAT
GQTVTVSRISGGNPLLKADDRHVVKLGLTAKPWTKLNLSFTANYNNSRTENAILSIADGS
AALEEAFPEHFERDAAGQLTSIDTRAVNIAREDREQLRWGINFTQVLRAPKRPTPPPGFR
PPWMRDRPEGGRPNGETRYDRPPEGTDPEHRDGPPPGEDGDIVVNGRELRDPSGPGRPGG
FDGPPDGFGPPPGGPPPEGFGPPPPGGPGGFGPPPPGGFRGGPGGPGGGGSDNGARLQFS
LYHSVILKDEIVLREGLAPIDLMDGGTLGGTPRARHNVQLNTGVIDNGVGVRLSGSWKSA
AEVTGTSPAGDLRFGALATFELRVFANLANRFRGKDWARGTRVSLSIANLLNTRQKVTDA
SGATPLAYQGAYLDPEGRTLLLSVRRIF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaccaggatgaagctgctcgcgggcgcggcgctggccgtgctcgccccggcg
gcgcacgcccagacccaggcaccgcccaggcaggacaaccccgctcccaagcagggcgag
gacgacatcgtcgtcaccggcaaggccccgccgggatcggtgatcggcgacattccgccg
gagaaccggctcggccaagccgatatcgccgcctatggcgtgggcacggtgagcgagttg
ctcgacgcgatcgccgagcagactgcgagcgcgcagggccgcgacgacgagggcccagtg
gtgctggtcaacggcaagcgtatctcgggcgtcaacgaagtctcggatctgccgacggaa
tcgatcgtccgcgtcgatatcctgcccgaggaagtcgcgctcaaatatggctatgacgca
cagcgcaaggtggtgaacatcatccttcgccggcgcttcgaagggcgcgtcgccaacctg
gccggcgggctcgcgaccgagggccagggcgagaatgggagcggcgacttcacctatacc
cgcatccgcgacaatgaccgggtcaacatcgccgggcgggccaaatcgaccgcctcgctg
ctcgagagcgagcgcgacctggtgccggcgagcacagcagccgacggcacggacgaccgg
ggctatcgcacgctcaagcccgctacgcggagctatgggctgaacgccaatgtcgcccac
cagctgggcgcgaagaccaatctctcggtcaacctgcgcggggactatacgagcagcgac
gggctgaacggcctgccgctcggcaccacgagcttcctctcggacgatccgctgcgccag
gacagccgcactacgacggtgggtggcggggtgacgctcaaccacgacctgagcaggcgc
tggcggctgtcggcggtggcgagctacagccatgccgacacgcggcgggataccgatcgc
gcggacagcggcatgatcggcaccgaccgggccagttcgctgaccgataccggcaatgcc
agcctgctggtcaacggcaagctgctcgctttgcccgccggcgatgccgcggtgagcgtg
cgactggggggcgatttcagttcgctgagcacccggagcacgctgggcggcacagccaca
tcgggcgacagcagccggaccaatgcgggcgggcagatcagcctcgacctgccgctggcc
agccgcgccaaaggcgtgctgccgttcctcggcaagctgaccgccaatctcaacggcggg
gtcacgcaggtctccgactacggcacgctcggcaccttcggctatgggctgaactggacc
ccggtcacggggttgagcctgatcgcggcggtgaacgaggaccgcgtggcccccaccctc
gcccagcgcggcgacgcggtggtgatcaccgacaatgtccgcgcctatgactatgccacc
ggccagacggtgacggtcagccggatctcgggcggcaacccgctgctcaaggccgatgac
cgccacgtggtcaagctgggactgaccgccaagccctggaccaagctcaatctgagcttc
accgccaactacaacaacagccgcaccgagaatgctatcctcagcatcgccgacggctcg
gcggcgctggaagaggcatttcccgagcatttcgaacgggatgccgccggccagctgacc
agtatcgacacccgcgcagtcaacatcgcccgcgaagatcgcgagcagctgcgctggggc
atcaacttcacccaggtgctgcgcgcacccaagcgaccgacgcctcctccgggcttccgg
ccgccatggatgcgcgaccggcccgagggcggacggccgaacggggaaacccgctacgac
cgtccgcccgagggcaccgatcccgagcatcgcgatggcccgccgcccggcgaggacggc
gacatcgtggtcaatggccgcgaactgcgcgaccccagcgggcccggccggccgggcggg
ttcgacgggccgccggacggattcggtccgcccccgggaggtccgccgcccgaaggcttc
ggaccgcctcccccgggcggaccgggcgggttcgggccgccaccgccgggcggtttccgc
ggtgggccgggagggcctggcggcggaggcagcgacaatggcgcacggctgcaattctcg
ctctaccacagcgtgatcctgaaggatgaaatcgtgctgcgcgaggggcttgcgccgatc
gacctgatggacggcgggacgctgggcggcaccccgcgggcgcggcacaatgtgcaactc
aacaccggtgtgatcgacaatggcgtgggcgtgcgcctgtcggggagctggaagagcgcg
gccgaggtgaccggcacgtcaccggccggggatttgcgcttcggggcgctggcgactttc
gagcttcgggtcttcgccaacctggccaaccgcttccgcggcaaggactgggcgcgcggg
acaagggtgagcctgtcgatcgccaacctgctgaacacgcggcagaaagtgaccgatgcc
agcggtgcgaccccgctcgcctatcagggggcctatctcgatcccgaggggcggacgctg
ctgctgtcggtgcggcggattttctag
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