Sphingomonas sp. NIBR02145: O3305_12435
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Entry
O3305_12435 CDS
T10953
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spnb02000
]
O3305_12435
Transporters [BR:
spnb02000
]
Other transporters
Pores ion channels [TC:
1
]
O3305_12435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WHU01026
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All DBs
Position
complement(2812708..2815764)
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AA seq
1018 aa
AA seq
DB search
MLYNKTKLHRLARSAAPLALALGMIATPAYAQTSTTPQDKPAAADEGDSIVVTGSLLRRT
DTETPSPVTVLTSDSLAKAGITTMSDAIRSISADSAGSIGTGFQTGFSAGGSAVSLRGLG
VSSTLVLVDGLRSTNFPINDDGHNAYVDLNSLPFSLVDRVEVLKDGASSTYGADAIGGVV
NIILKKQFNGVAGTVEGGVAERGDAGHLRADLTVGFGDYEKSGFNFYLNGEYQRDDRVSN
HDRGFPYNTQDLTAIGGNDNNTADSGLTVNTPTAYVVRTTQSDLNNPLSGGTAVTNDPGQ
TYATYTALGIANCARPTYTVTTGAARGVGCPYDLTDLYRQIQPLQERYSVNGRLSVRLSD
NIEGYVTGSFSRSYVSITSAFPSAIRQTQPFGGSPLVATSNPGVVLPYFVCSAGTNCATA
ADRRLNPNNPYATNAAATPAIAAANAARIYYLFGDIPGGSERTNDVYRFSAGLNGSLAND
SWRWRVEGVYARDNLEITQHGLINIAALRQVINTGAYNFVNPSQNTQAVRSFLAPDKTTP
SYSEMYSADVSLTGELAQLPGGPLQLAVGGQVRHETLENNNQNAALDTYGLTTSSAFGSH
TVYAAFAELDAPILSSLDINLSGRYDHYSEGYGRFSPKVGIKFTPIREFAVRGTYSQGFR
APTFAEAGPRSQYAGFVTITPPGAFCAQHGGSNNSGSCANGGNPYNFQYSVGRGFAGNPN
LEPEKSRSFTAGAIFQPAKWFSATVDYYNVKKTNLVANGPLAGAAINAYYSVAGNSYASA
AAASAAGCAAVAAVGAGYSCNLIDGVDPLFPNALPRVLIVNAPFVNVNSDTTEGLDFSAT
FSAPFGGGVKFTSRVEATYVLRYDRDTAAGIQRFAGSFGPYDLSSGNGTPRIRGNWQNTL
DFGNYTISATAYYVGRIKEVSTDQGNLSTSCSANLYKVPASAPGYEKFCYVNSFINIDLN
QTFRVNDDFTFFVNVKNLLDARAPIAPAAYASAPNFLTTWHYAGLIGRQFRAGATFKF
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacaacaagacgaagttgcaccgtcttgcccgcagcgcggcgcctctggcgctt
gcgctcggcatgatcgcgacgcctgcctatgcgcagacgagcacgacgccacaggacaag
cctgccgcagccgacgaaggcgattcgatcgtcgtcaccggctcgctgctgcgccgcacc
gacaccgagacgccgtcgccggttaccgtgctgacctcggactcgctggccaaggcgggc
atcaccacgatgagcgacgccatccgctcgatctcggccgacagcgccggctcgatcggc
accggcttccagaccggcttctcggcgggcggctccgccgtgtcgctgcgcggcctgggc
gtctcgtcgacgctcgttcttgtcgatggcctgcgctcgaccaacttcccgatcaacgat
gacggccacaacgcctatgtcgacctgaactcgctaccgttcagcctggtggaccgcgtc
gaagtgctgaaggacggcgcgtcctcgacctatggcgcggacgcgatcggtggcgtggtc
aacatcatcctgaagaagcagttcaacggcgtcgcgggcaccgtcgagggcggcgtggcc
gagcgcggagacgcgggccatcttcgcgccgatctcacggtgggcttcggcgactatgag
aagtcgggcttcaacttctacctcaacggcgaatatcagcgcgacgatcgcgtcagcaat
catgaccgcggcttcccgtacaatacgcaggatctgactgcgatcggcggcaacgacaac
aacaccgccgacagcggcctcacggtcaacacgcccactgcctatgtcgtgcgcacgacg
cagagcgatctcaacaacccgctgagcggcggcaccgccgtgaccaacgatcccggccag
acctatgcgacctacaccgcgctgggcatcgccaactgcgcgcggccgacctacacggtc
accaccggcgctgcccgcggcgtcggctgcccgtatgacctgaccgacctgtaccgacag
atccagccgctgcaggagcgctactcggtcaatggccgcctgagcgtccgcctcagcgac
aacatcgaaggctatgtcaccggcagcttcagccgcagctacgtctcgatcaccagcgcc
ttcccgtcggcgatccgccagacccagccgttcggcggcagcccgctcgtcgcgacgagc
aatccgggcgtcgtcctcccgtatttcgtctgctcggcgggaacgaactgcgccacggct
gcggatcggcgcctgaatccgaacaatccctatgccaccaacgcggccgcaactcctgcg
atcgcagccgcgaatgccgcccgcatctattatctgttcggcgacatcccgggcggcagc
gagcgtaccaacgatgtgtaccgcttcagtgcgggcctcaatggcagcctcgccaacgac
agctggcgttggcgggtcgagggcgtctatgcccgcgacaatctggagatcacccagcac
ggcctgatcaacatcgccgcgctgcgccaggtgatcaacaccggcgcgtacaacttcgtc
aatccgagccagaacacccaggccgttcgcagcttcctggcgccggacaagaccacgccg
tcctattcggaaatgtattcggccgacgtttcgctcaccggcgagctggcgcagttgccg
ggcggaccgttgcagctcgccgtgggtggccaggtgcggcatgagacgctggagaacaac
aaccagaacgccgcactcgatacctacggtctgaccacctcctcggctttcggctcgcat
accgtgtacgctgccttcgccgagctcgacgcgccgatcctgtcgtcgctcgatatcaac
ctgtccggccgctatgaccattattcggaaggctatggccgcttctcgccgaaggtgggt
atcaagttcacgccgatccgcgagttcgcggtgcgcgggacctactcgcagggcttccgc
gccccgaccttcgccgaggccggtccccgcagccaatatgccggcttcgtgacgatcacg
ccgccgggcgcgttctgcgcgcagcatggcggcagcaataattccggctcgtgcgccaac
ggcggcaacccgtacaacttccagtattcggtgggccgcggtttcgccggcaatccgaac
ctcgagcctgaaaagtcgcgcagcttcaccgccggcgcgatcttccagccggcgaagtgg
ttcagcgccacggtcgactattacaatgtgaagaagaccaacctcgtggcgaatggtccg
ctcgccggggccgcgatcaacgcctattactcggttgccggcaacagctacgcatcggcg
gccgcggcgtcggctgcaggctgtgccgcagtggccgcggtcggggcaggctattcgtgt
aacctgatcgacggcgtcgatccgctgttcccgaatgcgctgccgcgcgtgctgatcgtc
aacgcgccgttcgtgaacgtgaactcggacacgactgagggtctcgacttctcggcgacc
ttctcggctccgttcggcggtggggtgaagttcaccagccgtgtcgaggcgacctatgtg
ctgcgctacgaccgcgacacggcggcgggcatccagcgctttgccggtagcttcggcccc
tacgacctgtcgtcgggtaacggtacgccgcgcatccgcggcaactggcagaacacgctc
gacttcggcaactacacgatcagcgcgacggcctattatgtcggccggatcaaggaagtc
tcgaccgaccagggcaacctgtccacgtcgtgctctgcgaacctgtacaaggtgccggca
tcggcgccgggttatgagaagttctgctacgtcaatagcttcatcaatattgacctgaac
cagaccttccgcgtcaacgacgacttcactttcttcgtgaacgtgaagaacctgctcgac
gcccgtgcaccgatcgctccggcggcctatgcgagcgcgccgaacttcctcaccacctgg
cactatgccggcctgatcggccgccagttccgggcgggcgcgaccttcaagttctga
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