Sphingomonas sp. NIBR02145: O3305_13010
Help
Entry
O3305_13010 CDS
T10953
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
O3305_13010 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spnb03400
]
O3305_13010 (mutS)
DNA repair and recombination proteins [BR:
spnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
O3305_13010 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WHU05177
LinkDB
All DBs
Position
2936654..2939233
Genome browser
AA seq
859 aa
AA seq
DB search
MMAQYLALKAEAEDCLLFYRMGDFFELFFEDAKIASAVLDIALTARGEHDGERIPMCGVP
VHAMEGYLARLIKAGHRVAIANQTETPEEARKRMGSKALVNRAIVRVVTAGTLTEESLLD
SRTANWCAAIGEAGGSVAIACADISTGRFEIIETTTDRAGAEIARLSPAETVVGDGSSFD
ELATVTRPRVDFDSAAGEDRLKRLFGVATLDGFGQFSRAALAAAGGLTAYLEHNAKGSLP
FLRPPRVTRTEAAMAIDAATRESLELTVSSAGTRKGSLLDSVDRTVTGAGARLLGSDIAA
PLMDRPGVEARLDLVTHFHDDALLRDMVRGALRAMPDIGRALGRLAAGRGSPRDLGQLRD
GLDGAWRLAERLEATGIPPLLADLIPQMRGHGALIDLLSRALVPEPPVDAANGGYIAEGY
DAALDDLRDAGAGGRRAIAALEAEYRTRTGIGSLKIRHNGVLGYHIEVPAKNADPLMAQD
SGFTHRQTLAGVVRFNAPELHDVAVKVTQAGAHALAAEAAHLEDLTNRALGDRETIARTA
DALARIDVSAGLAERAAEGGWARPHLVEHACFEIEGGRHPVVEDAVAKSGGRFVANDCNL
SESSRLWLVTGPNMGGKSTFLRQNALIAVLAQAGSYVPAARATLGMVDRLFSRVGASDNL
ARGRSTFMVEMVETAAILAQATPRSFVILDEVGRGTSTYDGLAIAWSVVEAIHEDNRCRC
LFATHYHELTRLAERCDALTLHHVRAREWKGDLVLLHEVAEGPADRSYGLAVARLAGLPP
ITIKRAKAVLDKLEAGRAQTGGLAAGLDDLPLFAANAVEEEEAVDVLRTELGALDIDSLS
PREALEMLYRLKGLAAEGA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcaatatctggcgctcaaggccgaggccgaggattgcctgctcttctaccgg
atgggcgacttcttcgagctgttcttcgaggacgccaagatcgccagcgcggtgctcgac
atcgcactgaccgcgcgcggcgagcatgacggcgagcgcatcccgatgtgcggcgtgccg
gtgcatgcgatggagggctatctcgcccgcctgatcaaggccggccaccgcgtcgccatc
gccaaccagaccgagacgccggaggaagcgcgcaagcgcatgggctccaaggcgctggtc
aaccgcgccatcgtccgcgtcgtcaccgccggcacgctgaccgaggaatcgctgctcgac
agccgcaccgcaaactggtgcgcggcgatcggagaagcgggcggcagcgtcgcaatcgcc
tgcgccgacatctccaccggccgcttcgagatcatcgagacgacgaccgaccgcgccggc
gccgagatcgcccgcctctctcccgccgaaaccgtggtcggcgacggatcgtccttcgac
gaactcgccaccgtcacccgcccgcgcgtcgacttcgacagcgccgccggcgaggaccgg
ctcaagcggctgttcggcgtggcgacgctcgacggcttcgggcaattctcccgtgccgcg
ctggccgcggcgggcggcctcacggcttatctcgagcataatgccaagggctcgctgccc
tttctgcgcccgccccgcgtcacccgcaccgaagcggcgatggcgatcgacgccgcgacg
cgcgagagcctggaactcaccgtcagctcggcgggcacccgcaagggcagcctgctcgac
agcgtggaccgtaccgtcaccggcgccggcgcgcgcctgcttggcagcgacatcgccgcg
ccgctgatggaccgccctggcgtcgaggcccgcctcgatctcgtcacccatttccatgac
gacgccctgctgcgcgacatggtccgcggcgcattgcgggccatgcccgacatcggccgc
gcgctcggccgtctcgccgccgggcgcggctccccgcgcgaccttggccagctgcgcgac
ggcctggacggcgcctggcgccttgccgaaaggcttgaggcgaccggcattccgccactg
ctcgccgacctgatcccgcagatgcgcggccacggtgcgctgatcgacctgctcagccgc
gcgctcgtcccggagccgccggtcgatgccgcgaatggcgggtacatcgccgagggctat
gacgcagcgctcgacgacctgcgcgacgccggcgccggcggccgccgcgccatcgccgcg
ctcgaagccgagtatcgcacccgaaccggcatcggctcgctcaagatccgccataacggc
gtgctcggctatcatatcgaagtgccggccaagaatgccgatccgctgatggcgcaggac
agcggcttcacccatcgccagacgctggccggcgtggtccgcttcaacgcgcccgagctc
cacgatgtcgcggtcaaggttacccaggccggcgcccatgcgctcgccgccgaagccgcg
catctcgaggacctcaccaaccgggcgctcggcgaccgcgagaccattgcccgcactgcc
gacgcgcttgcccggatcgatgtctccgccggcctcgccgaacgcgccgccgaaggcggc
tgggcccgcccgcatctcgtcgagcatgcctgtttcgagatcgagggtggacgccatccg
gtggtcgaggacgccgtggcgaagagcggcgggcgcttcgtcgccaatgactgcaacctg
tccgagagcagccggctctggctggtcaccggcccgaacatgggcggcaagtcgaccttc
ctgcgccagaacgcgctgatcgcggtgctggcccaggccggcagctacgtccccgctgcc
cgcgcgacgctcggcatggtcgaccggctgttcagccgcgtcggcgcttccgacaacctc
gcccggggccgctctaccttcatggtcgagatggtcgagaccgccgcgatcctcgcccag
gcgaccccgcgcagcttcgtcatcctcgacgaggtcggccgcggcacctcgacctatgac
ggcctcgccatcgcctggtcggtggtcgaggcgatccatgaggacaatcgctgccgctgc
ctgttcgccacccactatcacgagctgacccggctggccgagcgctgcgacgcgctcacc
ctccaccatgtccgcgcgcgcgagtggaagggcgatctcgtcctcctccacgaagtcgcc
gagggcccggccgatcgcagctatggcctggccgtcgcgcgcctcgccggcctgcccccg
atcacgatcaagcgcgccaaggcagtgctcgacaagcttgaggccggccgcgcccagacc
ggcgggctcgcggcggggctggacgacctgccgctattcgccgccaacgcggtggaagag
gaagaagcggtcgatgtactgcgcaccgagctcggcgcgctcgacatcgacagcctgtcc
ccccgcgaggcgctggagatgctctaccggctcaagggcctggcggcggaaggcgcatga
DBGET
integrated database retrieval system
