Sphingomonas sp. NIBR02145: O3305_16765
Help
Entry
O3305_16765 CDS
T10953
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spnb03016
]
O3305_16765 (truB)
Enzymes [BR:
spnb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
O3305_16765 (truB)
Transfer RNA biogenesis [BR:
spnb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O3305_16765 (truB)
Prokaryotic type
O3305_16765 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
HTH_TbsP_C
Motif
Other DBs
NCBI-ProteinID:
WHU01832
LinkDB
All DBs
Position
3695199..3696149
Genome browser
AA seq
316 aa
AA seq
DB search
MHGWIILDKPLGLGSTQGVSAVKRALRDGKYGKFKVGHGGTLDPLATGVLPIALGEATKL
AGRMLDSDKVYDFTIGFGVQTDTLDLEGKEVAASDVRPTLAQVEAVLPRFTGPIDQVPPA
YSALKVDGERAYDLARAGEEVTLASRSVVIHSLSRLPGLEPGSRLLGAADNSGTPGQARG
DELEQITLTAHVSKGTYIRSLARDIALALGTVGHVTMLRRVKAGPFTLESAISLDKLDEA
AKGRSLEQLLLPLRAGLDDIPALSLTPDQAGLLRQGRVLAGIAKEDGQYFACLGDTPIAL
VEALSGEIRVVRGFNI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcatggttggatcatcctcgataaacccctcggccttggctcgacgcaaggcgtgagc
gccgtcaagcgcgcgctgcgcgacggcaagtacggcaagttcaaggtcggccatggcggc
acgctcgatccgctggcgaccggggtactgccgatcgcgctgggcgaggcgaccaagctc
gccggccggatgctcgacagcgacaaggtgtatgatttcaccattgggttcggcgtgcag
accgacacgctcgacctggaaggcaaggaagtcgccgcgtcggacgtgcgacccaccctg
gcgcaggtcgaggcggtgctgccgcgcttcaccggtccgatcgatcaggtgccgccggcc
tattccgcgctcaaggtggacggcgagcgcgcctatgaccttgcccgtgcgggggaagag
gtgacgctggcctcgcgatccgtcgtcatccacagcctgtcccgtctccccgggcttgag
ccggggtcccgcttgctcggggccgcggacaatagcgggaccccgggtcaagcccggggt
gacgaactggagcagatcacgctcaccgcccatgtctccaagggcacctatatccgcagc
ctcgcgcgtgacattgcgctggcgctcggcacggtcggccatgtcaccatgctgcgccgg
gtgaaggctggtcccttcactctggagtccgcgatttcgctggacaaactggacgaagcc
gctaagggccgctcccttgaacaacttctcctgccattgagggcggggctggacgacatc
ccggctctatccctcacccccgaccaggcagggctgctccgacaggggcgggttctggcc
gggatcgccaaggaagacggccaatatttcgcgtgcctgggggataccccgatcgcgctg
gtggaggctctatccggtgaaatccgggtcgtccgcggcttcaatatctaa
DBGET
integrated database retrieval system
