Sphingomonas sp. NIBR02145: O3305_17210
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Entry
O3305_17210 CDS
T10953
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00550
Peptidoglycan biosynthesis
spnb01100
Metabolic pathways
spnb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
O3305_17210
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3305_17210
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spnb01003
]
O3305_17210
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spnb01011
]
O3305_17210
Enzymes [BR:
spnb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
O3305_17210
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
O3305_17210
Glycosyltransferases [BR:
spnb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
O3305_17210
Peptidoglycan biosynthesis and degradation proteins [BR:
spnb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
O3305_17210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WHU01913
LinkDB
All DBs
Position
complement(3775116..3777632)
Genome browser
AA seq
838 aa
AA seq
DB search
MSDGSTTSSVKMRIKREIGGFKGLFGRVRHRWWFRILAVLALLSGLFVFLVWLFIARNLP
SVDTLKNYEPPLPTNVRSAEGLPIYSYARERRVQLSFPEYPKLLVEAYMSAEDKTFFEHH
GVDFPGLVRAAFQGLVSGSTPRGTSTITQQVAKNLLVGNETSYLRKAKEGILAWRMEDVL
TKQQIMELYLNSIELGRNAGGVEAASQAYFGKELDQLTLPQMAYLAILPKGPSNYDPERH
TQRALDRRNWVLGQMLENGFIDQAQHDSAVASPLGTVPRQTPKFERVGGYFTEEVRRQLI
DKFGETDETGPYSVYSGGLWVRTSLDPKLQEYAQKALRDGLLRYDRGRGWSGPIGHADIG
RSWLQSFLNTNIGLDYENWRAGVLIDRTGDSWQIGFDDGSTGTLPKWAAAMPVRGKGGQA
FDAFKPGDIVAVAPEAGGQWALRSVPKVSGGMVVEDPRTGRILAMQGGFDSRIQSFNRAT
QAQRQPGSTIKPIVYAAALEQGMTPASIVVDGPFCVWQGASLGQKCFRNFGNARGAGPKT
LRWGIEQSRNLMTVQIANQTGMDHVVDLMQRIGVSRQKFPPYLSYALGAGETTVTRMVNA
YSILVNHGRALNPSLIDFVQNRKGAVVWPENWRPCEGCNAPDWKGGAMPRPVTRAKQVLD
PLSAYQMVHIAEGVVQRGTATVLRDLGRPMMGKTGTTSGPTDVWFVGGTPQMIGGLYIGY
DTPTNLGGYAQGGSIAAPIFKQFAIPAFEGMEKVPFTAPQGIRMVRIDRASGKPVTGAWP
SSDPLSGVIWEAFKPETDQRRGRRDQEEQPEAKAIEKKAAPKKQEGDSDFLQREGGIY
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggttccaccacttccagcgtaaagatgcgcatcaagcgcgagatcgggggc
ttcaaggggctgttcggtcgcgtccgccaccgctggtggttccggatcctcgcggtgctc
gcgctgctctctggcctgttcgtgttcctcgtctggcttttcatcgcgcgcaacctgccg
tcggtcgatacgctgaagaactacgagccgccgctgccgaccaatgtccgctcggccgag
ggcctgccgatctacagctatgcccgcgagcgccgcgtgcagctgagcttccccgaatac
ccgaagctgctggtcgaggcgtatatgtccgccgaggacaagaccttcttcgagcatcac
ggcgtcgatttccccggcctggtccgcgcggccttccagggtctggtcagcggctccacg
ccgcgcggcacctcgacgatcacccagcaggttgccaagaacctattggtcggcaacgag
acgagttacctgcgcaaggccaaggagggcatcctcgcctggcgcatggaggacgtgctc
accaagcagcagatcatggagctgtacctcaactcgatcgagctggggcgcaacgccggc
ggcgtcgaggcggcaagccaggcctatttcggcaaggagctcgaccagctgaccctgccg
cagatggcctatctggcgatcctgcccaagggcccgtccaactatgatcccgaacgccac
acccagcgcgcgctcgatcgccgcaactgggtgctcgggcagatgctcgagaacggcttc
atcgaccaggcccagcatgattcggcagtcgcctcgccgctcggcacggtgccgcgccag
acgccgaaattcgagcgcgtcggcggctatttcaccgaggaagtgcgccgccagctgatc
gacaagttcggcgagaccgacgagaccggcccctacagcgtctattcgggcggcctgtgg
gtgcgcacctcgctcgaccccaagctgcaggaatatgcccagaaggcactgcgcgacggt
ctgctgcgctatgaccgcggccgtggctggtccgggccgatcggccatgcggatatcggc
aggagctggctccagtcgttcctcaacaccaatatcggcctcgactacgagaattggcgc
gcgggcgtgctgatcgatcgtaccggcgacagctggcagatcggcttcgacgacggctcg
accggcacgctgccaaaatgggccgcggccatgccggtgcgcggcaagggcggtcaggca
ttcgatgcgttcaagccgggcgacatcgtcgcggtggcgccggaagccggcgggcaatgg
gcgctgcgctcggtccccaaggtctcgggcggcatggtggtcgaggatccgcgcaccggg
cgcatcctcgccatgcagggcggcttcgattcgcgcatccagagcttcaaccgcgccacc
caggcgcaacgccagccgggctcgacgatcaagccgatcgtctatgccgccgcgctcgag
cagggcatgacccccgcctcgatcgtggtcgatggcccgttctgcgtgtggcagggggcc
agcctcggccagaagtgcttccgcaatttcggcaatgcccgcggcgctggtcccaagacg
ctgcgctggggcatcgagcagtcgcgcaacctgatgacggtgcagatcgccaaccagacc
ggcatggatcacgtcgtcgacctgatgcagcgaatcggcgtgtcgcgacagaaattcccg
ccctatctcagctatgcgttgggcgcgggcgagacgaccgtgacccgcatggtcaacgcc
tattcgatcctggtgaaccacggccgggcactcaacccgtcgctgatcgacttcgtccag
aaccggaagggcgcggtggtgtggccggagaactggcgcccgtgcgaaggctgcaacgcg
cccgactggaagggcggcgcgatgccgcgcccggtcacccgcgccaagcaggtgctcgat
ccgctctccgcctatcagatggttcatatcgccgagggcgtcgtccagcgcggcaccgcc
acggtgctacgcgacctgggccgcccgatgatgggcaagaccggcaccacctcgggcccg
accgacgtctggttcgtcggcggcaccccgcagatgatcggcggcctctatatcggctat
gacacgccgaccaacctgggcggctatgcccagggtggctctatcgccgcgccgatcttc
aagcagttcgccatccccgccttcgaaggcatggagaaggttcccttcaccgcgccgcag
ggcatccgcatggtccgcatcgaccgcgccagcggcaagccggtgaccggcgcctggccg
tcgagcgatccgctttcgggcgtgatctgggaagcgttcaagcccgagaccgaccagcgc
cgcggccgccgcgaccaggaagaacagcccgaggccaaggccatcgagaagaaggccgcc
cccaagaagcaggaaggcgacagcgacttcttgcaacgcgagggcggaatctactag
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