Sphingomonas sp. NIBR02145: O3305_17445
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Entry
O3305_17445 CDS
T10953
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
spnb Sphingomonas sp. NIBR02145
Brite
Enzymes [BR:
spnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
O3305_17445 (gyrB)
DNA replication proteins [BR:
spnb03032
]
Prokaryotic type
DNA Topoisomerases
O3305_17445 (gyrB)
DNA repair and recombination proteins [BR:
spnb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O3305_17445 (gyrB)
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Other DBs
NCBI-ProteinID:
WHU05224
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Position
complement(3845797..3848337)
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AA seq
846 aa
AA seq
DB search
MLGMASDDTTPENTPNQNSYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSD
NAIDEALAGHCDKIIIQLNADGSVSVEDNGRGIPTGIHKEEGVSAAEVIMTQLHAGGKFE
NTSDDNAYKVSGGLHGVGVSVVNALSEWLDLNIWRDGEEHWMRFAYGDATAPLKVIGKAP
EGKKGTRVTFLASTEKAPGDGGTFRNQIEYDFDKLEHRYRELAFLNSGVRLFLRDARHEE
VKEVELYYEGGIAAFVKWLDRNKQPLMPDPVAIAGTRDDVTIDVALEWNDSYYENVLCFT
NNIPQRDGGTHLAAFRAALTRTINSYADKSGMLKKEKVTLTGDDMREGLTAIVSVKLPDP
KFSSQTKDKLVSSEVRQPLESLMADKLAEYLEENPANAKTIIQKVIDAAAAREAAKKARE
LTRRKGVLDIASLPGKLADCQERDPAKSELFFVEGDSAGGSAKQGRDRQFQAILPLRGKI
LNVERARFDRMLASREIGTIITALGTGIRDDFNIEKLRYHKIVIMTDADVDGAHIRTLLL
TFFYRQMPEIIQAGHLYIAQPPLYKATKGRSEVYLKDDTALDQYLVEGGVGLTRLETHEG
PIFGEELMKLVDHARRMRTLMRYVPRRYAPDIVEALALAGAFDPDASREQRDERLGAVTR
RLDQTDEDARWSARVTEDGGFHFERLWRGVTDHHIIEAAFLVSAEGRKLHTLAAEQAQSY
AVLAKLVPAKTAATEEVAAPAAEDGEELVAAAKGETLVARPSELLDAILAAGRKGLSIQR
YKGLGEMNAEQLWETTLDPANRSMLVVQIDQADVADEIFTQLMGDVVEPRRDFIQENALS
VANLDV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcatggcaagcgacgacaccactcccgaaaataccccgaaccagaacagctac
ggcgcagactcgatcaaggtcctcaagggactggacgcagtgcgcaagcgccccggcatg
tatatcggcgacaccgacgacggttcgggcctccaccacatggtgttcgaggtctcggac
aacgcgatcgacgaggcgctggccgggcattgcgacaagatcatcatccagctgaacgcg
gacggctcggtctcggtcgaggacaatggccgcggcatcccgaccggcatccacaaggaa
gaaggcgtctcggcggccgaggtcatcatgacccagctccatgccggcggtaagttcgag
aacaccagcgacgataacgcctacaaggtatcgggcggcctgcacggcgtgggcgtctcg
gtggtcaacgcgctttccgagtggctcgacctcaacatctggcgcgacggcgaggagcat
tggatgcgcttcgcctatggcgacgcgaccgcgccgctcaaggtgatcggcaaggccccc
gagggcaagaagggcacgcgcgtgaccttcctcgcctcgaccgaaaaggccccgggcgac
ggcggcaccttccgcaaccagatcgaatatgacttcgacaagctcgagcaccgctatcgc
gagctggccttcctcaattcgggcgtgcgcctgttcctgcgcgacgcgcggcacgaggaa
gtgaaggaagtcgagctttattacgagggcggcatcgcggccttcgtgaagtggctcgac
cgcaacaagcagccgctgatgcccgatcccgtggcgatcgccggcacccgcgacgacgtg
accatcgacgtggcgctggagtggaacgactcctattatgagaacgtcctctgcttcacc
aacaacatcccgcagcgggatggcggcacccacctcgcggcgttccgcgcggcgctgacc
cgcacgatcaacagctatgccgacaagagcggcatgctgaagaaggagaaggtgacgctc
accggcgacgacatgcgcgaaggcctgaccgcgatcgtctcggtcaagctgccggatccg
aagttcagctcgcagaccaaggacaagctggtctcgtccgaagtgcgccagccgctcgag
agcctgatggcggacaagctggccgagtatctcgaagagaacccggccaacgccaagacg
atcatccagaaggtgatcgacgctgccgccgcccgcgaagccgccaagaaggcgcgcgag
ctgacccggcgcaagggcgtgctcgacatcgccagcctgcccggcaagcttgccgactgc
caggagcgcgatccggccaagtccgaactgttcttcgtcgagggtgactcggcaggcggc
tccgcgaagcagggccgcgaccgccagttccaggcgatcctgccgctgcgcggcaagatc
ctgaacgtcgagcgcgcgcgcttcgaccggatgctcgccagccgcgagatcggcacgatc
atcacggcgctgggcaccggcatccgcgacgacttcaacatcgagaagctgcgctaccac
aagatcgtcatcatgaccgacgcagacgtggacggcgcgcatatccgcacgctgctgctc
accttcttctaccggcagatgcccgagatcatccaggccgggcacctctatatcgcccag
ccgccgctctacaaggcgaccaagggccgcagcgaagtgtatctgaaggacgataccgcg
ctcgaccagtatctggtcgaaggcggcgtgggcctcacccggctcgagacgcatgaaggc
ccgatcttcggcgaggagctgatgaagctggtcgaccatgcccggcgcatgcggaccctg
atgcgctacgtgccgcgccgctatgcacccgacatcgtcgaggcgctggcgctggccggc
gcgttcgatccggacgcgagccgcgagcagcgcgacgagcggctgggcgcggtgacccgc
cggctcgaccagaccgacgaggatgcgcgctggagcgcccgcgtgaccgaggatggcggt
ttccacttcgagcggctgtggcgcggcgtgaccgatcaccacatcatcgaggcggcgttc
ctggtctcggccgaagggcgcaagctccacacgctcgccgccgagcaggcgcagagctat
gcggtgctcgccaagctggtgccggcaaagaccgccgcgaccgaggaggttgccgcgccg
gcagccgaggacggcgaggaactggtcgccgccgccaagggcgagacgctggtcgcgcgc
ccgagcgaactgctcgacgcgatcctggcggcgggccgcaagggcctgtcgatccagcgc
tacaagggtcttggcgagatgaacgccgagcagctgtgggaaaccacgctcgatccggca
aaccgctcgatgctggtggtgcagatcgaccaggccgatgtcgccgacgagatcttcacc
cagctgatgggcgacgtggtcgagccgcgccgcgacttcatccaggagaacgcactgagc
gtggccaacctggacgtctga
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