Sphingomonas sp. NIBR02145: O3305_17470
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Entry
O3305_17470 CDS
T10953
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07729
putative transcriptional regulator
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spnb03000
]
O3305_17470
Transcription factors [BR:
spnb03000
]
Prokaryotic type
Helix-turn-helix
Other families
O3305_17470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
HTH_24
HTH_23
HTH_25
HTH_Crp_2
Xre-like-HTH
HTH_11
MarR_2
HTH_38
HTH_28
HTH_AsnC-type
Sigma70_r4
Phage_CI_repr
GntR
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WHU01963
LinkDB
All DBs
Position
3852773..3852991
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AA seq
72 aa
AA seq
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MKNRLRVLRAEAGLSQGDLAGLLGVSRQTINAVETDKYDPSLPLAMRLSKIFGVPIDVIF
LDDWTPPELPNG
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccggctccgcgtgctgcgggccgaggccggcctcagccagggcgacctggcc
gggctgctcggcgtctcgcgccagacgatcaatgcggtcgagaccgacaaatacgacccg
agcctgccgctggcgatgcggctttcgaagatctttggagtgcccatcgatgtcatcttc
ctcgacgactggaccccgcccgagctccccaatggctag
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