Sphingomonas sp. NIBR02145: O3305_17805
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Entry
O3305_17805 CDS
T10953
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O3305_17805 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spnb03019
]
O3305_17805 (groL)
03110 Chaperones and folding catalysts [BR:
spnb03110
]
O3305_17805 (groL)
03029 Mitochondrial biogenesis [BR:
spnb03029
]
O3305_17805 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spnb04147
]
O3305_17805 (groL)
Enzymes [BR:
spnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
O3305_17805 (groL)
Messenger RNA biogenesis [BR:
spnb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
O3305_17805 (groL)
Chaperones and folding catalysts [BR:
spnb03110
]
Heat shock proteins
HSP60 / Chaperonin
O3305_17805 (groL)
Mitochondrial biogenesis [BR:
spnb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
O3305_17805 (groL)
Exosome [BR:
spnb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
O3305_17805 (groL)
Exosomal proteins of other body fluids (saliva and urine)
O3305_17805 (groL)
Exosomal proteins of breast cancer cells
O3305_17805 (groL)
Exosomal proteins of colorectal cancer cells
O3305_17805 (groL)
Exosomal proteins of bladder cancer cells
O3305_17805 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WHU02027
LinkDB
All DBs
Position
complement(3923079..3924722)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVTKVVEDIKSRSKPVAGTNEVAQVGIISANGDTEVGQKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMAVELADPYILIHEKKLSNLQSMLPILEAV
VQTGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTKGEV
VSEDLGIKLESVTLGMLGTAKRVTIDKDNTTIVDGAGEADAIKGRTEAIRQQIEVTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALDGVTGANEDQTRGVDIVRRSLSALVRQIAQNAGHDGAVVSGKLLDQTDTSFGFN
ASTDTYENLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAVSELPEDKPAMPAMGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtaaagttttcgcgcgacgcacgtgagcgcatcctgcgcggcgtg
gacatcctcgccgatgcggtgaaggtgaccctgggcccgaagggccgcaacgtcgtgatc
gagaagagcttcggcgcaccgcgcatcaccaaggacggcgtcagcgtcgccaaggaaatc
gagctcaaggacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgttctcgcccaggcgatcgtg
cgcgagggcatgaagtcggttgcggccggcatgaacccgatggacctgaagcgcggcatc
gatctcgccgtcaccaaggtcgtcgaggacatcaagtcgcgctcgaagccggttgccggc
accaatgaagtcgcccaggtcggcatcatctcggcgaacggcgacaccgaagtcggccag
aagatcgcggaagcgatggagaaggtcggcaaggaaggcgtgatcaccgtcgaagaggcg
aagggtctcgagttcgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaccaaccccgagaagatggccgtcgagctcgccgatccgtacatc
ctgatccacgagaagaagctgtcgaacctccagtcgatgctgccgatcctcgaggcggtg
gtgcagaccggccgtccgctgcttatcatcgcagaggacatcgagggtgaggccctggcc
acgctcgtcgtcaacaagctgcgcggcggcctgaaggtcgcagcggtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctcgaggacatcgccgtcctcaccaagggcgaagtc
gtctcggaagacctcggcatcaagctcgagagcgtcaccctgggcatgctcggcaccgcc
aagcgcgtcaccatcgacaaggacaacaccaccatcgtcgatggcgccggtgaagccgat
gcgatcaagggccgcaccgaggcgatccgccagcagatcgaagtcaccaccagcgactat
gaccgtgagaagctccaggagcgtctcgccaagctcgccggcggcgtggccgtgatcaag
gtcggcggtgcgaccgaggtcgaggtgaaggagcgcaaggaccgcgtcgacgacgcgctg
cacgcgacccgcgcagccgttgaagaaggcatcgtccccggcggcggcacggcgctgctc
tatgccaccaaggcgctcgacggcgtcaccggtgccaatgaggaccagacccgcggcgtc
gacatcgtgcgtcgttcgctctcggccctggtgcgccagatcgcgcagaatgccggccat
gacggcgcggtcgtctcgggcaagctgctcgaccagaccgacacctcgttcggcttcaac
gcgtcgaccgacacctatgagaacctggttgcggccggcgtgatcgacccgaccaaggtc
gtccgtaccgcgctccagaacgcggcttcggtcgccggcctgctcatcaccaccgaagcg
gcggtgagcgagctgccggaagacaagcccgccatgcccgccatgggcggcggcatgggt
ggcatgggcggcatggacttctaa
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