Sphingomonas sp. NIBR02145: O3305_17925
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Entry
O3305_17925 CDS
T10953
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00020
Citrate cycle (TCA cycle)
spnb00190
Oxidative phosphorylation
spnb00650
Butanoate metabolism
spnb00720
Other carbon fixation pathways
spnb01100
Metabolic pathways
spnb01110
Biosynthesis of secondary metabolites
spnb01120
Microbial metabolism in diverse environments
spnb01200
Carbon metabolism
Module
spnb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spnb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spnb_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
O3305_17925 (sdhA)
00650 Butanoate metabolism
O3305_17925 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
O3305_17925 (sdhA)
00720 Other carbon fixation pathways
O3305_17925 (sdhA)
Enzymes [BR:
spnb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
O3305_17925 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
S-Me-THD_N
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
WHU05230
LinkDB
All DBs
Position
complement(3947994..3949796)
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AA seq
600 aa
AA seq
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MMSAYKIIDHTYDAVVVGAGGSGLRATMGCAEAGLKTACITKVFPTRSHTVAAQGGIAAS
LGNNTPDHWSWHMFDTVKGSDWLGDQDAIEYMVREAPAAVYELEHAGVPFSRNDNGTIYQ
RPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYVEYFALDLIMEDGA
CRGVIALCMEDGSIHRFRSHAVVLATGGGGRVYQSATSAHTCTGDGNGMALRAGIALQDM
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVARSMAME
IREGRGVGKEKDHIFLHLNHIDPKILHERLPGITETGKIFAGVDLTRQPLPVVPTVHYNM
GGIPTNYHGEVVRNKDGDPDSVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGL
RLKELLKPGMKHNELPKGSEEFALGRLDHFRNAKGEKPTAQIRADMQKTMQRHCAVFRDS
ALLAEGVEHMKEVYKGFQDVGIQDRSLIWNTDLVETLELDNLIGQAVVTIECAANRKESR
GAHMHEDFPERDDKNWMKHTVATFEGWGGKGGATTIDYRPVHDYTLTDEIEYIKPKKRVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
ctgatgtccgcctacaagatcatcgaccacacctatgatgccgtcgtcgtcggcgccggc
ggttcgggcctgcgcgccaccatgggctgcgccgaggccgggttgaagaccgcctgcatc
accaaggtgttccccacccgctcgcacaccgtcgccgcccagggcggcatcgcggcgagc
ctcggcaacaacacgcccgatcactggtcgtggcacatgttcgacaccgtcaagggctcc
gactggctcggcgaccaggacgcgatcgagtacatggtccgcgaggctccggctgcggtc
tatgagctcgagcatgccggcgtgccgttcagccgcaacgacaatggcacgatctaccag
cgcccgttcggcggccacatgcagaacatgggcgaaggcccgcccgtgcagcgcacctgc
gccgcggcggaccgtaccggccacgccatgctccacgcgctctaccagcagagcctgaag
tatgacgccgacttctacgtcgaatatttcgcgctcgacctgatcatggaagatggcgcc
tgccgcggcgtgatcgccttgtgcatggaagacggctcgatccaccgcttccgttcgcat
gccgtggtgctcgccaccggcggcggcggccgcgtctaccagtcggcgacctcggcgcac
acctgcaccggcgacggcaacggcatggcgctgcgcgcgggcatcgcgctgcaggacatg
gagttcgtccagttccacccgaccggcatctacggcgccggcgtcctcatcaccgagggc
gcacgcggtgaaggcggctacctgaccaactccgagggcgagcgcttcatggagcgctat
gccccgtcggccaaggaccttgccagccgcgacgtcgtcgcgcgctcgatggcgatggaa
atccgcgagggccgcggcgtcggcaaggagaaggatcacatcttccttcacctcaaccat
atcgatccgaagatcctgcacgagcgcctgccgggcatcaccgagaccggcaagatcttc
gccggcgtcgacctgacccgccagccgctgccggtggtgccgaccgtccactataatatg
ggcggcatccccacgaactatcacggcgaagtcgtccgcaataaggacggcgatccggac
tcggtcgtccccggcctgttcgcggtcggcgaagcggcctgcgtgtcggtccacggcgcc
aaccgcctcggctccaactcgctgatcgacctcgtcgtgttcggtcgcgccaccggtctc
cgcctcaaggagctgctcaagcccggcatgaagcacaacgagcttcccaagggttcggag
gagttcgcgctcggccgcctcgatcacttccgcaacgccaagggcgaaaagcccaccgcg
cagatccgcgccgacatgcagaagacgatgcagcgccactgcgccgtgttccgcgacagc
gcgctgctggcggaaggcgtcgagcacatgaaggaagtctataagggcttccaggatgtg
ggcatccaggaccgctcgctgatctggaacaccgacctggtcgagacgcttgagctcgac
aacctgatcggccaggccgtcgtcaccatcgagtgcgccgccaaccgcaaggaaagccgc
ggcgcgcacatgcacgaggacttccccgagcgcgacgacaagaactggatgaagcacacc
gtcgccaccttcgagggctggggcggcaagggcggcgcgacgaccatcgattaccgcccg
gtccacgactacacgctcaccgacgagatcgagtacatcaagccgaagaagcgggtgtac
tga
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