KEGG   Sphingomonas sp. NIBR02145: O3305_18720
Entry
O3305_18720       CDS       T10953                                 
Name
(GenBank) exonuclease domain-containing protein
  KO
K10857  exodeoxyribonuclease X [EC:3.1.11.-]
Organism
spnb  Sphingomonas sp. NIBR02145
Pathway
spnb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spnb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    O3305_18720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spnb03400]
    O3305_18720
DNA repair and recombination proteins [BR:spnb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     O3305_18720
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: WHU02196
LinkDB
Position
complement(4108200..4108964)
AA seq 254 aa
MASSYPPIIRVIDLETTGDKPPAHAVIEIGWQDVALGKDGRWELYGEGGNRMVNPGRPIP
PLTMAIHHIRDEDVADAPWWHDVARPILDPWPRRLALAAHRATFEEQFCTPALTRGADWI
CTWKCAMRLWPDSGGFSNQFLRYWRNPEGLEHARGLPAHRAFPDAYVTAHHLRDMLNQTS
VEQLIEWSKAPGLLPRVRYGPDRGKEWTEIDDDSLATFLTDRDEDIRFTAQTELARRHSG
GQIRQSLPAQDTLF
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcgtcatcctacccgcccatcatccgcgtcatcgatctcgagaccaccggcgacaag
ccgcccgcgcacgccgtgatcgagatcggctggcaggacgtcgcactgggcaaggatggg
cgctgggagctgtacggcgagggcggcaaccggatggtcaatccgggccggccgatcccg
ccgctgaccatggcgatccaccatatccgcgacgaggacgtcgccgacgcgccgtggtgg
cacgacgtcgcccggcctatcctcgatccctggccgcgccgcctcgcccttgcggcacat
cgcgcgaccttcgaggagcagttctgcacccccgcgctcacccgcggcgccgactggatc
tgcacctggaagtgcgcgatgcgcctctggcccgacagcggcggcttctcgaaccagttc
ctgcgctactggcgcaatcccgaggggctggagcatgcgcgcggcctgcccgcgcaccgc
gcctttcccgacgcctatgtgaccgcgcaccatctgcgcgacatgctcaaccagacgagc
gtcgagcagctgatcgaatggtccaaggcgccggggctgctgccacgcgtgcgctacggc
cccgatcgcggcaaggaatggaccgagatcgacgacgactcgcttgccaccttcctgacc
gaccgcgacgaggacatacgcttcaccgcgcagaccgagctggcgcgacgccatagcggc
ggccagatccgccagtcgctgccggcgcaggacacgttgttctaa

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