Sphingomonas sp. NIBR02145: O3305_18970
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Entry
O3305_18970 CDS
T10953
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spnb Sphingomonas sp. NIBR02145
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spnb03016
]
O3305_18970 (miaB)
Enzymes [BR:
spnb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
O3305_18970 (miaB)
Transfer RNA biogenesis [BR:
spnb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
O3305_18970 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WHU02244
LinkDB
All DBs
Position
complement(4153798..4155132)
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AA seq
444 aa
AA seq
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MNAPKNPKTFHVKSFGCQMNVYDGERMAELMAAQGMTSTADADSADLIVLNTCHIREKAT
EKVFSDIGRLRKQAAAADRAAPMIAVAGCVAQAEGEEIVRRAKVDVVVGPQAYHNLPELV
AKAAAGTSALDTDMPANSKFGALPRRRKVGPTAFLTVQEGCDKFCTYCVVPYTRGAEISR
PFAELVDEARALVDAGAREITLLGQNVNAWDDDAGTGLHGLIHALDWIEGLERIRYTTSH
PNDMREGLIRAHAEVGKLMPFLHLPVQAGSDRILKAMNRSHSRDSYLKILDRVRAARPDI
ALSGDFIVGFPGESDAEFEETLSLVDAVGYAQCFSFKYSPRPGTPAAELRDQYIPAEVMD
ERLQRLQAALNRDQLAFNQATIGKTCAVLIERQGKLPGQMLGKSPWLQSVYLNTDAKIGD
MVEVEITGGFGNSLTGVEKVKAAA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcccaagaatcccaagaccttccacgtcaagtcgttcggctgccagatgaac
gtctatgacggcgagcgcatggccgagctgatggctgcgcagggcatgacttcgactgcc
gacgccgacagtgccgacctgatcgtgctcaacacctgccatatccgcgaaaaggcgacc
gagaaggtgttctcggacatcggccgcctgcgcaagcaggccgccgccgccgatcgcgcc
gcgccgatgatcgcggtcgccggctgcgtcgcgcaggccgagggcgaggagatcgtccgc
cgcgccaaggtcgatgtcgtggtcggcccgcaggcctatcacaacctgcccgaactggtc
gccaaggccgccgccggcacttccgcgctcgacacggacatgcccgccaacagcaagttc
ggcgcgctgcccaggcgccgcaaggtcggccccaccgccttcctcaccgtgcaggaaggc
tgcgacaagttctgcacctattgcgtggtgccctatacccgcggcgccgagatcagccgc
cccttcgccgagctggtcgacgaggccagggcgctggtcgatgccggcgcgcgcgagatc
accctgctcggccagaacgtcaacgcctgggacgatgacgccggcaccgggctgcacggc
ctgatccacgcgctcgactggatcgaggggcttgagcgcatccgctacaccaccagccat
cccaacgacatgcgcgagggcctgatccgcgcccatgccgaggtcggcaagctgatgccg
ttcctgcacctgcccgtgcaggccggcagcgatcgcatcctcaaggcgatgaaccgcagc
cacagccgcgattcctacctgaagatcctcgatcgcgtccgcgcggcccgcccggatatc
gcgctgtcgggcgatttcatcgtcggcttccccggcgagagcgatgccgagttcgaggag
actttgagcctggtcgacgcggtcggctatgcgcaatgcttcagcttcaagtacagcccg
cgccccggcactccggcagccgagctgcgcgaccagtatatccccgctgaagtgatggac
gagcgcctccagcgcctccaggccgcgctcaaccgcgatcagctcgccttcaaccaggcg
accatcggcaagacctgcgccgtgctgatcgagcgccagggcaagctccccggccagatg
ctcggcaagtcgccctggctccagtcggtgtatctgaacaccgacgcgaagatcggcgac
atggtcgaggtcgagatcaccggcggcttcggcaactcgctgaccggcgtggaaaaggtc
aaggccgcggcctga
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