Sphingomonas sp. NIBR02145: O3305_19795
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Entry
O3305_19795 CDS
T10953
Name
(GenBank) thiol-activated cytolysin family protein
KO
K11031
thiol-activated cytolysin
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O3305_19795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
spnb02042
]
O3305_19795
Bacterial toxins [BR:
spnb02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
O3305_19795
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Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Thiol_cytolys_C
Motif
Other DBs
NCBI-ProteinID:
WHU02399
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Position
complement(4331068..4332492)
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AA seq
474 aa
AA seq
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MLLALAPGVAAQVADPVESFLLGLPRDATQLLSLAAPAVPPVSRRETQVQTIVCEPQELS
GSQLEDSFAILSADTNRIYPGAILVVDQRLAQGRPTVTSYPRPPLALNISLPGLGADARF
LVQQPSAGTVHAAVDGVVSAWLSGPAGRGYQAPAIVSYRRTRSYNAQQAAAGLGFSAQWA
GGRASAMLSASSDQSRATYLAVFRQVFYTVGVDRPRNVAGFFRRDVSLARLRSDFGPARL
PGYVSSVAYGRLILVSMETDASVTEADAKAALDYATGGTGAKGQVNAHARRVANNSRFGV
IVLGGGAEHAARVVAHGPDNDRQVKDIIESGSQLARDNPGLPIGYTVNLLTGELAHARYD
GPFAVPSCRTLDNYAIELRHDGGYRGRFIVRWQQPRGVGEETEDRSWHSGVQTAGWRRTI
SVPADALGLTVLGELDFFHNDWRQAGYWNEVSRRRAGTCLRIAGTTVQPQSGTC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcgccctggccccgggcgtcgcggcccaagtcgccgatccggtcgagtccttc
ctgctcggcctgccgcgcgatgcgacccagttgctgtcgctcgcggcaccggccgtgccg
cccgtttcccgccgcgagacgcaggtacagacgatcgtctgtgaaccgcaggagctcagc
ggcagccagctggaggattcctttgcgatcctgtccgccgacaccaaccggatctacccc
ggggcgatcctggtcgtcgaccagcggctcgcccagggccggccgaccgtcaccagctac
ccgcgcccgcccctcgccctgaacatctcgctgcccggcctcggcgccgatgcgcggttc
ctggtccagcagccgagtgcgggcaccgtccatgccgcggtcgacggcgtcgtcagcgcc
tggctatccggcccggccgggcgaggctatcaggcgccggcgatcgtcagctaccgcagg
acgcgctcctacaacgcgcagcaggccgccgcgggcctgggcttcagcgcgcaatgggcc
gggggccgggcttcggcaatgctctcggcgtcgagcgaccagtccagggcgacctacctc
gcggtcttccggcaggttttctatactgtcggggtcgaccgcccgcgcaacgtcgcaggc
ttcttccgcagggatgtcagcctcgcgcggctgcgcagcgacttcggccctgcccggttg
cccggctatgtgagcagcgtcgcctatggccggctcatcctggtcagcatggagaccgac
gcctcggtcaccgaagcggacgcgaaagcggcgctcgactatgcgacgggcgggaccggc
gccaaggggcaggtcaacgcgcacgcgcggcgcgtggcgaacaattcgcgcttcggggtc
atcgtccttggcggcggcgccgaacatgcggcgcgggtcgtcgcccatggtccggacaac
gaccggcaggtgaaggacatcatcgagagcggcagccagctcgcccgggacaatccgggc
ctgccgatcggctatacggtcaacctgctgaccggcgagctggcccatgcccgctacgat
ggtcccttcgcggtaccgagttgcaggaccctcgacaattacgcgatcgagctgcgccac
gacggcgggtaccggggccggttcatcgtcagatggcagcagccgcggggtgtcggcgag
gagaccgaggacagaagctggcatagcggtgtccagaccgcgggctggcggcgcaccatt
tccgttcccgcggacgccctgggcctcaccgtgctgggcgagctggatttcttccacaac
gactggcgccaggctggctactggaatgaggtttcgaggcggcgcgcggggacctgcctg
cgcatcgccgggacgaccgtgcagccgcaatccggcacctgctga
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