Sphingomonas sp. NIBR02145: O3305_20755
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Entry
O3305_20755 CDS
T10953
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O3305_20755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spnb03400
]
O3305_20755
Enzymes [BR:
spnb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
O3305_20755
DNA repair and recombination proteins [BR:
spnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
O3305_20755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HTH_Tnp_Tc3_2
LsmAD
Motif
Other DBs
NCBI-ProteinID:
WHU02580
LinkDB
All DBs
Position
complement(4530397..4531020)
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AA seq
207 aa
AA seq
DB search
MGLSAEQLKASLDALASREPLIAAAIGRVGYPPPRIRDRGYETLLRTIVGQQVSVAAAQS
IWNKMAAQLGTLSDPETVARVSDDDLRAAGLSRQKVAYARSLAEEVTSGRLDFAHLAEDD
EEAIAQLVRIKGIGRWSAEVYLLFAEGRPDIWPAGDLAVQIEVGRIMGHAERPSEKLTRE
IAEAWRPHRGAAAVFAWHHYNSEMEVI
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggggctgagcgccgagcagctcaaggcgtcgctggacgccctggcgagccgcgagccg
ctgatcgccgccgcgatcgggcgcgtaggctatcctccgccccgcatccgcgaccggggc
tatgagacgctgctgcgtacgatcgtcggccagcaggtgagcgtcgccgcggcgcagtcg
atctggaacaagatggccgcgcagctgggcacgctgagcgatccggagaccgttgcccgg
gtcagcgacgacgatctgcgcgcggccgggctatcgcggcaaaaggtcgcctatgcccgc
agccttgccgaggaagtgaccagcgggcggctcgacttcgcgcatctggcagaggacgat
gaggaagcgatcgcccagcttgtccggatcaagggcatcggtcgctggtccgccgaggtc
tatctgctgttcgcggagggccggcccgacatctggccggcgggcgacctggcggtgcag
atcgaagtcgggcggatcatgggccatgccgagcggccgagcgagaagcttacccgggag
atcgccgaagcctggcgcccgcatcgcggcgcggcggcggtgttcgcgtggcaccattat
aattccgagatggaagtgatctga
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