Sphingomonas sp. NIBR02145: O3305_22910
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Entry
O3305_22910 CDS
T10953
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00521
Streptomycin biosynthesis
spnb00523
Polyketide sugar unit biosynthesis
spnb00525
Acarbose and validamycin biosynthesis
spnb00541
Biosynthesis of various nucleotide sugars
spnb01100
Metabolic pathways
spnb01110
Biosynthesis of secondary metabolites
spnb01250
Biosynthesis of nucleotide sugars
Module
spnb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O3305_22910 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
O3305_22910 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
O3305_22910 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
O3305_22910 (rfbB)
00525 Acarbose and validamycin biosynthesis
O3305_22910 (rfbB)
Enzymes [BR:
spnb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
O3305_22910 (rfbB)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
adh_short
KR
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WHU02994
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All DBs
Position
4967682..4968737
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AA seq
351 aa
AA seq
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MKTILVTGGAGFIGSAVVRHLVRKGLRIINLDKLTYAGNPASLKAIENAANHRFVQGDIA
DVPLLLGLLREERVDGIMHLAAESHVDRSIDGPGAFVETNVVGTFRLLSAALEYWRGLEG
DARAGFRFHHVSTDEVFGDLPFDSGIFTEETSYAPSSPYSASKAASDHFVRAWHETYGLP
VVLSNCSNNYGPYHFPEKLIPLTILNALEGKPLPVYGKGENVRDWLFVEDHARALELVLT
QGRVGESYNIGGNQERANLSVVEAICDALDRRVPLAEGGARRGLIRFVTDRPGHDRRYAI
DASKIARELGWTPQESFETGLDRTIDWYLENRWWWEPIRSGTYAGERLGGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccattctcgtcacgggaggcgcaggcttcatcggttcggcggtggtgcgccat
ctggtccgcaagggccttcgcatcatcaacctcgacaagctcacctatgcgggcaatccg
gcctcgctgaaggccatcgagaacgccgcgaaccatcgtttcgtccagggcgatatcgcc
gatgttcccctgctgctcggcttgttgcgcgaggagcgggtcgacgggatcatgcatctt
gcggcggagagccatgtcgatcgctcgatcgatggccccggggcgttcgtggagaccaat
gtcgtcgggacgttccggctgctttccgccgctctggaatattggcgcgggctggaaggc
gacgccagggcgggattccgcttccaccatgtttccaccgacgaggtgttcggggacctg
ccgttcgacagcggcatcttcaccgaggagacgtcctacgcgccttcctcgccctattcg
gcctccaaggcggcttcggaccatttcgtccgtgcctggcacgagacctatgggctgccg
gttgtgctgtccaactgctcgaacaattacgggccctatcacttcccagagaagctgatc
ccgctgaccattctcaatgcgctcgagggcaagccattgcccgtctacggcaagggcgag
aatgtgcgcgactggctgttcgtcgaggaccacgcgcgggcgctcgagcttgtgctcacc
caggggcgtgtcggcgagagctacaatatcggcggcaatcaggaacgggccaacctctcg
gtggtcgaggcgatctgcgacgcgctggatcgtcgcgtcccgctggccgaaggcggcgcg
cgccgggggctcatccggttcgtgaccgatcgcccgggccatgaccggcgatacgcgatc
gatgcttcgaagatcgcccgggagctgggctggacgccgcaggagagtttcgagacgggt
ctcgatcgcacgatcgactggtatctcgaaaatcgctggtggtgggagccgatccggtcg
ggaacctatgccggcgaacggctgggaggcgcatga
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