Sphingomonas sp. NIBR02145: O3305_22945
Help
Entry
O3305_22945 CDS
T10953
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00051
Fructose and mannose metabolism
spnb00541
Biosynthesis of various nucleotide sugars
spnb01100
Metabolic pathways
spnb01250
Biosynthesis of nucleotide sugars
Module
spnb_M01017
GDP-L-Col biosynthesis, GDP-Man => GDP-L-Col
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
O3305_22945 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O3305_22945 (gmd)
Enzymes [BR:
spnb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
O3305_22945 (gmd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WHU03001
LinkDB
All DBs
Position
4976993..4978099
Genome browser
AA seq
368 aa
AA seq
DB search
MSSGQKVALITGITGQDGSYLAEFLLQKGYVVHGIKRRSSSFNTGRIDHIFQDPHAQDVN
LHLHYGDLADSTNLIRLMQQIQPDEVYNLGAQSHVAVSFELPEYTADVTGVGALRVLEAI
RLLGLQERTRFYQASSSELYGLVQTVPQTEKTPFYPRSPYAVAKLYAYWITVNYREAYGM
YACNGILFNHESPRRGETFVTRKITRGLCNIAQGLENCLYLGNLDAKRDWGHARDYVRMQ
WLMLQQETPKDYVIATGVQFSVREFLTWSAEGLGITLRFEGEGVEERGIVEAVSGDNAPA
VKPGDVIVRVDPKYFRPAEVETLLGDPALAKDDLGWLPEISTRDLCAEMVEADLKAARRA
ALIAHSGY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagttctggtcaaaaggttgcgctgatcaccggaatcacggggcaggacggatcctat
cttgccgagtttctgctgcagaagggctatgtcgtccacggcatcaagcgccggtccagc
tcgttcaacaccgggcgcatcgaccatatcttccaggacccgcacgcccaggatgtgaac
ctgcatctccactatggcgatctggcggactccacgaacctcattcggctgatgcagcag
atccagccggacgaggtctataatctcggcgcgcagagccacgtcgcggtttcgttcgag
ctgcccgaatataccgccgacgtcaccggcgtgggcgccctccgcgtgctcgaggcgatc
cgcctgctcgggctccaggagcgcacgcgcttctatcaggcatcgagcagcgagctctat
ggcctggtgcagacggtgccgcagaccgagaagacgcccttctatccgcgcagcccctat
gcggtggcgaagctctacgcctattggatcacggtgaattatcgtgaggcctatgggatg
tacgcctgcaacggcatcctgttcaatcatgagagcccgcgccgcggcgagaccttcgtc
acccgcaagatcacccgcggcctttgcaacatcgcgcaggggcttgagaattgcctgtat
ctcggcaatctcgatgcgaagcgcgactgggggcatgcgcgcgattatgtgcggatgcag
tggctcatgctgcagcaggaaacccccaaggactatgtgatcgcgaccggcgtgcagttc
agcgtccgcgagttcctgacctggagcgccgaaggcctcgggatcacgctgcgcttcgag
ggcgagggcgttgaggagcgcggcatcgtcgaggcggtcagcggcgacaatgcgccggca
gtgaagccgggcgacgtgatcgtgcgcgtcgatccgaaatatttccgtccggccgaagtc
gagaccctgctcggtgatccggccctggcgaaggacgacctcggctggctgcccgagatt
tcgacccgcgatctctgcgcggaaatggtcgaggcggatctcaaggcggcgcgtcgcgct
gcgctcatcgcccattccgggtattga
DBGET
integrated database retrieval system