Streptococcus pneumoniae SPN034156 (serotype 3): SPN034156_12230
Help
Entry
SPN034156_12230 CDS
T02628
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spne
Streptococcus pneumoniae SPN034156 (serotype 3)
Pathway
spne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPN034156_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spne03019
]
SPN034156_12230
Messenger RNA biogenesis [BR:
spne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPN034156_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
CCP36892
LinkDB
All DBs
Position
complement(1266675..1268354)
Genome browser
AA seq
559 aa
AA seq
DB search
MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL
YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRLQ
QATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHGK
VNNIHTSGHGGQQEQKLMLCLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMSNG
DVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKSQM
ILSGPDILSRGFVYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRPFLY
ENTEREPIIIPMILTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcctacactcttaaacctgaagaagtcggcgtttttgccatcggtggtctaggagaa
atcgggaaaaacacttacggaattgaataccaagacgagattatcatcgtcgatgctggg
attaaattcccagaagatgacttgcttggtatcgactatgtcattcctgactactcttac
atcgtggacaatatcgaccgcgtcaaggctgttttaatcacacacggacacgaggaccac
attggtgggattccgttcctactcaagcaagcaaatgtccctatctacgctggaccgctt
gccttggctttgatccgtgggaaactcgaagaacacggcctcttgcgcaacgccaaactt
tacgaaatcaaccacaacaccgagttgacctttaaaaatctcaaggcaactttctttaga
acgactcactctattccagagcctttggggattgtcattcatactcctcaagggaaaatc
gtctgtacgggtgactttaagttcgactttactccagttggagaacctgcggacttgcat
cgtatggctgcgcttggtgaagaaggcgtgctctgtctcctgtctgactcgacaaatgcg
gaagtaccaacctttaccaactctgaaaaagtcgttggtcagtccattatgaagattatc
caaggtattgaaggacgtatcatctttgcatcctttgcctcaaatatcttccgtctccag
caggcaacagaagctgctgttaagactggacgcaagattgcggtctttggtcgttctatg
gaaaaggccattgtcaacggaatcgatcttggctacatcaaagctcctaagggaaccttt
atcgagccaaatgaaatcaaagattatcctgcaggagaagttcttatcctctgtacaggt
agtcagggtgagcctatggcagccctctctcgtatcgccaacggaacccaccgtcaagta
caattacaaccaggtgataccgttatcttctcttctagtcccatccctggaaacactact
agcgtcaacaagctgattaacatcatttctgaagctggtgtcgaagttatccacggtaaa
gtgaacaatatccatacatctggacacggtggtcagcaagagcaaaaactcatgctctgc
ttgattaagccaaaatacttcatgcctgtccacggtgaataccgcatgcaaaaagtccac
gctggactagcagtggatactggtgttgagaaggacaatatctttatcatgagcaatggc
gatgtgcttgcccttactgctgactcagctcgtatcgcaggtcatttcaacgcccaagat
atctatgtcgatggaaatcgtatcggtgaaattggcgcagctgtcctcaaagatcgtcgc
gatctatctgaagacggtgtcgttctggcagtcgcaactgttgacttcaaatcgcagatg
attctatctggtccagacatcctcagccgaggctttgtctacatgagagagtctggcgac
ttgattcgccaaagccagcgtatcctcttcaatgccattcgtatcgcactgaaaaataag
gatgctagcgtgcaatctgtcaatggtgccattgtcaacgctattcgccccttcctctat
gaaaataccgaacgtgaaccgatcatcatcccgatgatcctcacaccagatgaagaataa
DBGET
integrated database retrieval system
