Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_00446
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Entry
HMPREF1038_00446 CDS
T02334
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Pathway
spng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF1038_00446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spng03400
]
HMPREF1038_00446
Enzymes [BR:
spng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HMPREF1038_00446
DNA repair and recombination proteins [BR:
spng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF1038_00446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
UvrD_C
DEAD
HHH_5
RsgA_GTPase
AAA_22
nSTAND3
Herpes_Helicase
NTPase_1
AAA_28
5_3_exonuc
AAA_29
DNA_pol_lambd_f
AAA_12
PIF1
PTM_DIR17_Tudor
NPHP3_N
SLFN-g3_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
AFS42519
LinkDB
All DBs
Position
complement(394378..396816)
Genome browser
AA seq
812 aa
AA seq
DB search
MIGNYLNLPEQKHLNSHLFMQRNFMEVYFSGTIERIIFENPSNFYRILLLEIDDTDAEDF
DDFEIIVTGTMADVIEGEDYTFWGQIVQHSKYGEQLQISRYDRAKPTSKGLVKYFSSSHF
KGIGLKTAQKIVDTYGENTIDEILQHPEKLEGIAGFSAKNREAFVSTLRLNYGTEMVLSK
LANYGIPNKLAFQIQDFYKEETLDVVENYPYQLVEDIKGLGFTIADQLAEELGIESQAPE
RFRAGLVHSLFQACMETGDTYVEARDLLEQTLTLLESSRPVELDPSQVAQELSYLIEEDK
VQQIDTKIFDNSLFFAEEGIRSHLIRILEKGKQKSQDLETIQKHITTVEQELGIEYDNIQ
KQAICDAIQNKVFILTGGPGTGKTTVINGIIAVYALLEGLDLRKKSNLPILLAAPTGRAA
RRMNELTGLPSATIHRHLGMTGDDDTSHLEDYLDADFIIVDEFSMVDTWLANQLFSNISS
NSKILIVGDSDQLPSVSPGQVLADLLHIPLIPQTRLEKIYRQSKESTIVTLASQIRQGIL
PADFTQKKADRSYFEIASGHIPATIEKILGVALRNGIPARDIQVLAPMYRGTAGIDAINQ
LMQDLLNPPQKDQLSFEAPQCHYRKRDKVIHLVNDAEINVFNGDLGAITDLIPGKYTESK
QDEIVIDFDGNEVSYPRNEWYKIRLAYAMSIHKSQGSEFPVVILPITSASRRMLERNLIY
TAITRAKSKLILLGELQAFDYATQHIGTARKTYLIERFSDLLENVEEKQQAVSETVTSSA
SEQSYILTEENWDRIPAMIGITDTDLKEIFGK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgattggtaactatctaaacttaccagaacagaaacacctcaactctcacctattcatg
caaaggaattttatggaagtttatttttcaggaaccattgaacggattatttttgaaaat
cccagcaatttttatcgcatcctcctcctagaaatcgacgatacggacgcagaggatttt
gatgattttgaaatcattgtcacaggaaccatggctgatgtaattgagggcgaagactat
actttttgggggcaaattgtccagcactccaagtatggagaacaactgcaaatcagtcgt
tatgatcgcgcaaaaccaactagtaagggcttggtcaagtacttttcaagtagccatttc
aaggggattggtctcaagacagctcagaaaatcgtggatacctatggcgaaaataccatt
gacgaaattttgcaacacccagaaaagttagaaggcatcgcaggattctctgccaaaaat
cgcgaggctttcgtctccactctccgtctcaactacggaacggagatggttttgtccaaa
ctagccaactacggcattcccaacaaactagcctttcagattcaagacttttacaaggaa
gaaacccttgatgtggttgaaaattatccctaccagctggttgaggatatcaagggtttg
ggctttaccattgctgaccaactagctgaggaactaggcatcgaaagtcaggctcctgaa
cgcttccgcgccggtctagttcacagtctttttcaggcctgtatggaaacaggggacacc
tatgttgaagcacgggatttgctggaacaaacccttactctccttgagtcttcccgtccc
gtggaactagaccccagccaagttgcccaagagctctcctacctgatcgaagaagacaag
gttcagcagattgataccaagatctttgacaacagcctctttttcgctgaggaaggtatc
cgcagtcacttgattcgtatccttgaaaaaggaaaacagaagagccaagatttagaaact
attcaaaagcatatcactactgtcgagcaagagctgggaattgagtatgataacattcaa
aaacaggctatctgtgatgctatccagaataaggtctttatcctgacaggtggacctggt
actggtaagacaactgttatcaatgggatcatcgctgtttacgccctgttagagggactt
gacctcaggaagaaaagcaatctgcccattcttcttgctgctccaactggacgagccgct
cgccgcatgaatgaattgacaggtttgcctagcgcgaccatacaccgccacttgggaatg
acaggtgacgatgataccagtcatctggaagattacctagatgctgactttatcatcgtg
gatgaattctctatggtagatacttggctggccaatcaactcttctccaatatctcttct
aacagtaagatcctcatcgtaggtgacagtgatcagctaccttctgtcagtcctggacag
gttctagcggatctgcttcatattcctttgattcctcagactcgcttggaaaaaatttat
cgacaaagcaaagaatcaaccatcgtcaccctagctagtcagattcgacagggcatcttg
ccagctgatttcacccaaaaaaaagctgaccgttcctactttgaaattgctagtggccat
attcctgccaccattgaaaaaatcttaggtgtcgccctcagaaatggtattcctgcccgt
gatatccaagttctggctcctatgtaccgagggacggcagggattgatgctatcaatcag
ctcatgcaagacctgctcaatcccccacaaaaagatcaactcagttttgaagctcctcag
tgccactatcgtaagagagacaaggtcattcatttggttaacgatgctgaaatcaatgtc
tttaatggggatttaggagctatcacagacctgattcctggtaaatacaccgaatcgaaa
caagacgagattgtcattgattttgatggtaatgaagtctcttacccccgtaacgaatgg
tacaagattcgcttggcctatgccatgagtattcataagtctcagggaagtgagttccca
gttgtcatcctaccgattactagtgctagccgacgtatgctggagcgaaatctcatctac
acagccattacacgtgccaaaagcaaactcatcttactaggcgaattacaagccttcgac
tatgctacccaacacatcggaactgcccgaaaaacctatctgattgaacgcttcagtgat
ctactggagaatgttgaagaaaagcaacaagctgtctctgaaacagtcacatcaagtgcc
tctgaacaatcctacatcctaaccgaagaaaactgggaccgcatcccagccatgattggg
attacagacacagacctcaaagagatttttggaaaatag
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