Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_00633
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Entry
HMPREF1038_00633 CDS
T02334
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Pathway
spng03410
Base excision repair
spng03430
Mismatch repair
spng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF1038_00633
03430 Mismatch repair
HMPREF1038_00633
03440 Homologous recombination
HMPREF1038_00633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spng03400
]
HMPREF1038_00633
DNA repair and recombination proteins [BR:
spng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HMPREF1038_00633
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF1038_00633
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HMPREF1038_00633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AlaDh_PNT_C
YjeF_N
ThiG
DSPc
Motif
Other DBs
NCBI-ProteinID:
AFS42704
LinkDB
All DBs
Position
573036..575270
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AA seq
744 aa
AA seq
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MDVFLITPTYEWQFALQVEDADFTKIAKKAGLGPEVARLLFERGIQNQESLKKFLEPSLE
DLHDAYLLHDMDKAVERIRQAIEEGENILVYGDYDADGMTSASIVKESLEQLGAECRVYL
PNRFTDGYGPNASVYKYFIEQEGISLIVTVDNGVAGHEAIALAQSMGVDVIVTDHHSMPE
TLPDAYAIVHPEHPDADYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLT
DENRILVQYGLEMLGHTQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNP
AIDLLTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKEGWNPGV
LGIVAGRLLEELGQTVIVLNIEDGRAKGSARSVEAVDIFEALDPYRDLFIAFGGHAGAAG
MTLEVEQLSDLSQVLEDYVREKGADAGGKNKLNLDEELDLEALSLETVKSFERLAPFGMD
NQKPIFYIKNFQVESARTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFSQTKNLELA
VKLSVNQWNGQTALQLMMVDARVEGVQLFNIRGKNAVLPEGVPVLDFPGELPNLAASEAV
VVKNIPEDITQLKTIFQEQHFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQFPEFDI
RYKLKDLAAYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESQIYQNLKQ
TVKDQEMMALGTVQEIYDFLMEKE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctttttgataacacctacttatgaatggcagtttgccctgcaggtagaagat
gcggattttacaaagatagccaagaaggctggactgggtcctgaggtggctcggttattg
tttgagagagggattcagaaccaagaaagtctgaagaagtttttagaaccttccttggag
gacttacatgatgcttatctgctccatgatatggacaaggcagtggagcggattcgtcag
gctattgaagaaggggaaaatattctcgtttatggagactatgatgcggatggcatgact
tcggcttctattgtgaaggaaagtttggaacaacttggtgctgagtgccgagtttacctg
ccaaatcgttttaccgatggctatggccctaatgctagtgtttataaatactttatcgag
caagaagggatttccttgattgtgacggtggacaatggggttgctggtcatgaggctatt
gcattggctcagtctatgggagtagatgtcattgtgacagaccatcattccatgcctgaa
accctgccagatgcttatgctattgtccatcctgaacatccagatgcggattatcctttt
aaatatttggctggttgtggagttgctttcaagttggcttgtgccctgttagaagaagtg
caagtggaattgcttgatttggtcgctattggaactattgcagatatggtgagtctgacg
gatgaaaatcgtatcttagttcaatatggtctggaaatgttgggtcatacccagcgcatt
ggtctgcaagaaatgctggacatggctgggattgctgctaacgaagtaacagaagaaacg
gttggtttccagattgctcctcgtttgaatgccttgggccgcttggatgatcccaatcct
gccattgatttgttgactggatttgatgatgaggaagcgcatgagattgcccttatgatt
caccagaaaaacgaagagcgcaaggaaatcgttcagtctatctatgaagaagccaagacc
atggtggatcctgagaagaaggttcaggtcttggccaaggaaggctggaatcctggggtt
ctaggaatcgtggctggtcgtttattggaagaattgggacagacagtcattgttcttaat
atagaagacggtcgtgccaagggcagtgctcgtagtgtggaagcggtcgatatttttgaa
gctctggatccctatcgagatctcttcatcgcctttggaggtcatgcaggtgcagcgggt
atgacgctggaagttgagcaactctcagatttatctcaggttttggaagattatgttcgt
gaaaaaggtgcagatgctggtggcaagaataagttaaacctagatgaagagttggatttg
gaggcacttagcttggaaacggtcaaaagttttgaacgtttagctccttttggaatggat
aatcagaaacctattttttatatcaagaattttcaggtcgaaagtgctcgtactatgggg
gcaggtaatgcccatctaaagctgaaaatttccaagggtgaggcgagttttgaagtggta
gcctttggtcaaggcagatgggcgacagagttttctcaaaccaagaatctagagttagcg
gttaaattgtctgtcaaccaatggaatggccaaactgccctccagttgatgatggtggat
gcgcgagtggaaggtgttcaactttttaacattcgtggaaaaaatgcagtcttgccagaa
ggtgttccagtcttggattttcctggagaactgccaaatcttgcggctagtgaagctgtt
gtcgtaaaaaacattccagaggatattactcagctgaagaccatttttcaggaacagcat
ttctctgctgtctatttcaaaaatgatattgacaaggcttattatctgacaggttatggg
actagagatcagtttgccaaattgtacaagactatttaccagttcccagagtttgatatt
cgctacaagctgaaagatttggctgcatatcttaatattcaacaaatcttgctggtcaag
atgattcaagtatttgaagaactaggctttgtgacgataaaagatggtgtgatgacagtc
aataaagaggcgccaaagcgggagataggagaaagtcaaatttaccaaaatctcaaacaa
accgttaaagaccaagaaatgatggcgctgggtacggtgcaagaaatttatgattttttg
atggaaaaagagtag
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