Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_00701
Help
Entry
HMPREF1038_00701 CDS
T02334
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spng03016
]
HMPREF1038_00701 (rnz)
Enzymes [BR:
spng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HMPREF1038_00701 (rnz)
Transfer RNA biogenesis [BR:
spng03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HMPREF1038_00701 (rnz)
Prokaryotic type
HMPREF1038_00701 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFS42768
LinkDB
All DBs
Position
645707..646636
Genome browser
AA seq
309 aa
AA seq
DB search
MDIQFLGTGAGQPSKARNVSSLALKLLDEINEVWLFDCGEGTQNRILETTIRPRKVSKIF
ITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFVLTSLRVSGSRLPYRIHFH
EFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGTLDAKKLKAAGVPFGPLFG
KIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRKTDASVRLAVNADVLVHESTYG
KGDEKIARNHGHSTNMQAAQVAVEAGAKRLLLNHISARFLSKDISKLKKDAATIFENVHV
VKDLEEVEI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatattcaatttttaggaacgggggctggtcagccctctaaagcccgcaacgtttca
agtctcgccctgaaacttttggatgagattaacgaagtttggctctttgactgtggagaa
ggtacgcaaaatcgcattctggaaaccacaattcgaccacgtaaggtcagcaaaatcttt
attacccatctgcatggagaccacatttttggtttgccaggtttcctttctagccgtgcc
tttcaggccaatgaagagcagacagatttggaaatctacggacctcaaggaatcaagtca
tttgtcttaaccagccttcgtgtgtcaggttctcgtctgccctaccgcattcatttccat
gagtttgaccaagattctctgggtaaaattcttgaaaccgataaattcactgtgtatgca
gaggagctggaccacactattttctgtgttggctatcgtgtcatgcaaaaggatctagaa
gggacgctggatgctaaaaaactcaaggctgctggtgttccgttcggcccgctttttggt
aaaatcaaaaacggccaggatcttgttttggaagacggaactgaaatcaaggcagcagac
tatatctcagcgccacgtccaggtaagattatcactattttaggagacactcgaaaaacg
gatgccagtgtgcgtctggctgtcaatgcagatgtcctagttcatgagtccacttatggc
aagggtgatgaaaaaattgctcgtaaccatggtcactcaactaatatgcaagctgcacaa
gtagcggtagaagcaggtgccaaacgcctcctactcaaccatatcagtgcccgtttcctc
tcaaaagatataagcaaactcaagaaagacgctgccacaatttttgaaaatgtccatgtg
gtcaaagacttggaagaagtggaaatctag
DBGET
integrated database retrieval system
