Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_00772
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Entry
HMPREF1038_00772 CDS
T02334
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spng03019
]
HMPREF1038_00772 (rhlB)
03009 Ribosome biogenesis [BR:
spng03009
]
HMPREF1038_00772 (rhlB)
Enzymes [BR:
spng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HMPREF1038_00772 (rhlB)
Messenger RNA biogenesis [BR:
spng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF1038_00772 (rhlB)
Ribosome biogenesis [BR:
spng03009
]
Prokaryotic type
rRNA helicases
HMPREF1038_00772 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFS42838
LinkDB
All DBs
Position
709404..710747
Genome browser
AA seq
447 aa
AA seq
DB search
MSFTKFQFKNYIREALKELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIF
QQLDEASDSVQAVITAPSRELATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLES
NQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIADSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQSM
QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL
GIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRAENRARGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacgaaatttcaatttaaaaactatattagagaagccttgaaggagttaaaa
tttacaactccaacagaggtgcaagacaagttgattcctattgttttggcaggtcgtgac
ctagtaggagaatcaaaaacaggttcaggtaagactcatactttcttgttaccgattttt
cagcaattagatgaagctagcgatagtgtacaagcagtgattactgcaccgagtcgtgag
ttggctactcaaatttaccaagtagcgcgtcagatttcagctcactcagatgtcgaagtt
cgtgtggttaattatgtgggtggtacggataaggctcgccagattgagaaattggaaagc
aatcagcctcatattgttattggaacaccaggccgtatctacgacttggttaaatctggt
gatttagctattcataaagccaagacatttgttgttgatgaagcagatatgaccttggat
atgggattcttggaaactgttgataagattgctgacagtcttccaaaagacttgcaattc
atggtcttctcagcgactatcccacaaaaactgcaaccattcttgaaaaaatacttatca
aatcctgttatggagaaaattaagaccaaaacggttatttctgacaccattgataattgg
ttgatttcgaccaagggacatgataagaatgctcaaatttaccagttgactcagtcgatg
cagccgtatttggcaatgatttttgttaacactaaaacgcgtgctgatgaattgcattca
tatctgactgctcaaggcttgaaggttgcaaaaatccatggcgatattgcccctcgtgaa
cgcaagcgaatcatgaatcaggtgcaaaatctggattttgagtatattgtcgcaacagat
ttggcagcacgtgggattgacattgaaggtgtcagccatgtcatcaatgatgccattccg
caagacttatctttttttgttcaccgtgttggtcgtactggacgaaatggcctaccaggt
acagctattaccctttatcagccaagtgatgactcggatatccgtgagttggagaaattg
ggaatcaagtttagtcctaagatggtcaaagacggggaatttcaagatacctatgaccgt
gatcgtcgtgccaaccgtgagaaaaaacaagataaacttgatatcgaaatgattggtttg
gttaaaaagaaaaagaaaaaagtcaaaccgggttataagaagaaaattcaatgggcggtt
gatgaaaagcgccgtaaaaccaagcgtgctgaaaatcgcgctcgcggtcgtgcagagcgt
aaagctaaacgccaaacattttaa
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