Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_01045
Help
Entry
HMPREF1038_01045 CDS
T02334
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spng03400
]
HMPREF1038_01045
Enzymes [BR:
spng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF1038_01045
DNA repair and recombination proteins [BR:
spng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HMPREF1038_01045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
PDDEXK_1
AAA_30
AAA_7
AAA_16
KdpD
PIF1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFS43097
LinkDB
All DBs
Position
complement(963850..967500)
Genome browser
AA seq
1216 aa
AA seq
DB search
MKLIPFLSEEEIQKLQEAEANSSKEQKKTAEQIEAIYTSGQNILVSASAGSGKTFVMAER
ILDQLARGVEISQLFISTFTVKAATELKERLEKKISKKIQETDDVDLKQHLGRQLADLPN
AAIGTMDSFTQKFLGKHGYLLDIAPNFRILQNQSEQLLLENEVFHEVFEAHYQGKQKESF
SHLLKNFAGRGKDERGLRQQVYKIYDFLQSTSNPQKWLSESFLKGFEKADFTSEKEKLTE
QIKQALWDLESFFRYHLDNDAKEFAKAAYLENVQLILDEIGSLNQEFDSQAYQAVLARVV
AISKEKNGRALTNASRKADLKPLADAYNEERKTQFTKLGQLSDQIAILDYQERYHGDTWK
LAKTFQSFMSDFVEAYRQRKRQENAFEFADISHYTIEILENFPQVRESYQERFHEVMVDE
YQDTNHIQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNEKFQRYAQNPQEGKLIL
LKENFRSSSEVLSATNDVFERLMDQEVGEINYDNKHQLVFANTKLTPNPDNKAEFLLYDK
DDTGEEEESQTETKLTGEMRLVIKEILKLHQEKGVAFKEIALLTSSRSRNDQILLALSEY
GIPVKTDGEQNNYLQSLEVQVMLDTLRVIHNPLQDYALVALMKSPMFGFDEDELARLSLQ
KAEDKVHENLYEKLVNAQKMASSQKGLIHTALAEKLKQFMDILASWRLYAKTHSLYDLIW
KIYNDRFYYDYVGALPNGPARQANLYALALRADQFEKSNFKGLSRFIRMIDQVLEAQHDL
ASVAVAPPKDAVELMTIHKSKGLEFPYVFILNMDQDFNKQDSMSEVILSRQNGLGVKYIA
KMETGAVEDHYPKTIKLSIPSLTYRQNEEELQLASYSEQMRLLYVAMTRAEKKLYLVGKG
SREKLEVKQYPAAKNGKLNSNTRLQARNFQDWLWAISKVFTKDKLNFSYRFIGEDQLTRE
AIGELETKSPLQDSSQADNRQSDTIKEALEMLKEVEVYNTLHRAAIELPSVQTPSQIKKF
YEPVMDMEGVEIAGQGQSVGKKISFDLPDFSTKEKVTGAEIGSATHELMQRIDLSQQLTL
ASLTETLKQVQTSQAVRDKINLDKILAFFDTVLGQEILANTDHLYREQPFSMLKRDQKSQ
EDFVVRGILDGYLLYENKIVLFDYKTDRYDEPSQLVDRYRGQLALYEEALSRAYSIENIE
KYLILLGKDEVQVVKV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttattccctttttaagtgaggaggagattcaaaaactgcaagaagcagaagca
aattcgagcaaggaacagaagaaaactgccgaacaaatcgaagctatctacacttctggt
cagaatatcctggtctcagcatcggctggttctggaaagacctttgtcatggcagagcgc
attctggaccaattggcgcgtggtgtcgaaatttctcaactctttatctcaacctttacc
gtcaaggctgcaactgaacttaaagaacgtttagagaaaaaaatcagcaagaaaatccaa
gaaacagatgatgtcgatctcaaacaacacttgggtcgccagttggcagacctacccaac
gctgccatcggaaccatggactctttcacacaaaaattccttggcaaacatggttatctg
cttgatattgcacctaatttccgtattttacaaaaccaaagcgagcaacttcttctcgaa
aacgaagtctttcatgaggtctttgaagcgcattaccaaggtaaacagaaagagagcttt
agtcatttgctgaaaaactttgctgggcgtggcaaggacgaacggggtctgcggcagcaa
gtctataaaatctatgacttcctccaatccaccagtaatcctcaaaagtggctgagtgaa
tctttcctcaaaggctttgagaaagctgattttaccagtgaaaaagaaaaactgactgag
caaatcaaacaagccctctgggatttggaaagctttttccgttaccatctggataacgat
gccaaggagtttgcaaaggctgcctatttagaaaatgttcagttaattctggatgaaatt
ggctccctaaatcaggagttcgatagtcaggcttatcaggcagtacttgcgcgtgttgtc
gccatctctaaggagaaaaacggtcgtgctctgactaatgccagccgtaaggctgatttg
aagcccctggctgatgcctacaacgaagagagaaagacccagtttactaaactaggacaa
ttatcagaccagatagcgattctcgactatcaagaacgttatcatggagacacttggaaa
ctagctaaaaccttccaatctttcatgagcgattttgtagaggcttatcgtcagagaaaa
cgacaggaaaatgcctttgaattcgctgatatcagccattacaccattgagattttagaa
aatttcccacaagttcgtgagtcttatcaggagcgcttccatgaagtcatggtcgatgag
tatcaggataccaaccatattcaagaacggatgctggaattgttgtctaatggccacaat
cgctttatggtgggagatatcaagcaatccatctatcgtttccgtcaggcagacccgcag
attttcaatgagaaattccaacgctatgcgcaaaatccccaagaaggcaagctcattctc
ctcaaggaaaatttccgtagtagttcagaagtgctgtcagcaaccaatgatgtctttgaa
cgtctcatggaccaagaggtcggcgaaatcaactatgataacaagcaccagcttgttttt
gccaataccaaactgactcccaatccagacaacaaggcagaatttctcctctacgacaag
gacgatacaggtgaggaagaagagagtcaaacagaaacgaaactaacaggcgaaatgcgc
ttagttatcaaggagattctgaaacttcatcaagaaaaaggtgttgcctttaaggaaatt
gcccttctgacctccagccgcagtcgtaatgaccagattctcctcgccctgtctgagtac
gggattcctgtcaaaactgacggagagcaaaacaattatctccaatccctagaagtgcaa
gtcatgctagacactcttcgtgtcattcacaatcccctgcaagactatgccttggttgcc
cttatgaagtctccaatgtttggttttgatgaggatgagctagcacgtttgtcccttcag
aaagcagaggataaagtccacgaaaatctctatgagaaactggtcaatgcacaaaaaatg
gcaagtagtcaaaaaggcttgattcacacagctctagctgaaaaactaaagcaattcatg
gatatcctagcttcttggcgcttgtatgccaaaacccactctctctatgacttgatttgg
aagatttacaacgaccgtttttattatgactatgttggggctttgccgaatggtcctgct
aggcaggccaatctctatgccctagcactgcgtgctgatcaatttgaaaagagcaatttc
aaaggtttgtcgcgttttattcgtatgattgaccaagtcttagaagcccagcacgatttg
gcaagcgtggccgtcgcaccgccaaaagatgcagtagagctcatgaccatccacaagagt
aaagggctggagtttccttacgtctttatcctcaatatggatcaagatttcaacaagcaa
gactctatgtcagaagtcattctcagtcgtcagaatggtcttggtgtcaaatatattgcc
aagatggagacaggggcagtagaagaccactatcctaaaaccatcaaactctccattcct
agtctgacctataggcagaacgaagaggaattacagctagcaagctattctgagcagatg
cgtttgctgtatgttgctatgacgcgggctgagaaaaagctctatcttgtcggcaagggt
tctcgtgaaaagctggaagtcaagcaatacccagcagccaaaaatgggaaactaaatagc
aatactagactgcaagcacggaatttccaagattggctttgggctatcagtaaagtgttt
actaaggacaagctcaactttagttatcgttttattggcgaagatcagttgaccagagaa
gctatcggagagttggaaaccaagagtcctctccaagatagctcccaagcagacaatcgt
cagtcagataccatcaaagaagctctggaaatgctgaaggaggtggaagtttataatact
cttcaccgcgcagctattgaacttcctagtgttcaaaccccaagtcaaatcaagaaattc
tacgaaccagttatggatatggaaggtgtcgagattgctggtcaaggtcagtcagtaggc
aagaaaatcagcttcgatttgccagatttttcaaccaaagaaaaggtaactggagctgag
attggtagtgctactcacgaactcatgcagagaattgacctcagccagcaactaaccctt
gctagcctaacagaaacactcaaacaagttcaaactagccaagctgtcagagacaagatc
aatcttgataaaattcttgctttctttgacacagtactcggtcaggaaattcttgctaat
accgaccatctctatcgcgagcaacctttctccatgctcaaacgagaccaaaagagtcag
gaagactttgttgtccgtggtatccttgatggctatctgctttacgaaaacaaaattgtt
ctgttcgactacaagacagaccgctatgatgaaccaagtcaactcgtagaccgctatcgt
ggtcagttagctctatacgaagaggctttatcacgagcctattcgattgaaaatattgaa
aaatacttgattttactcggtaaagacgaggttcaagttgtaaaagtataa
DBGET
integrated database retrieval system
