Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_01046
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Entry
HMPREF1038_01046 CDS
T02334
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spng03400
]
HMPREF1038_01046
Enzymes [BR:
spng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF1038_01046
DNA repair and recombination proteins [BR:
spng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HMPREF1038_01046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Arg_decarb_HB
Med15_fungi
Motif
Other DBs
NCBI-ProteinID:
AFS43098
LinkDB
All DBs
Position
complement(967497..970796)
Genome browser
AA seq
1099 aa
AA seq
DB search
MKNSNEAEMKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLECLSQ
QASFSITVTRFAQMARYLVLNDLPAKTTLDDIGLGLAFYKCLAELDPKDLRVYGAIKQDP
QLIQQLIELYHEMTKSQMSFLDLENLTDEDKRADLLLIFEKVTAYLNQGQLAQGSQLSHL
IEAIENDKVSSDFNQITLVIDGFTRFSAEEERVVDLLHGKGVEIVIGAYASKKAYTSPFS
EGNLYQASVKFLHHLASKYQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKD
RENLQIWSCLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQYQ
IPFYLGRSEAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDLSQSDIDAFEQYI
RYLGINGLPAFQQIFTKSHHGKFNLERLNVLRLRILAPLETLFASRKQKAENLLQKWSVF
LKEGAVTKQLQDLTTTLEAVEQERQAEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSG
MSLSQYRTIPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNL
NQATEEGVQLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQELIH
FGFRRREKRMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKL
DLQGLENPAIPTSPSSKTLAKDTLQALYPAKQEFYLSTSGLTEFYRNEYSYFLRYVLGLQ
EELRLRPDARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEAIYQESLEAQ
FTKEVLLDVARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRL
KANGAIGVVDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGKQNFFGAMYLEMAEPVQS
LMAVKSLAGAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEEFQLLLDYNAYLY
KKAAEKILAGRFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLEKLDLADGKRL
VGEKLKQAWFEKIREELNR
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattccaacgaggctgagatgaaattactttatactgatattcggacttctttg
acagaaattctaacaagagaggcagaagagctagttgcagctggcaagcgggtcttctac
attgcccccaactctctttcttttgaaaaggaacgcgccgtgctggaatgcttgtcccag
caggcttctttttcgattaccgtcacgcgctttgctcaaatggctcgttatctggtcttg
aatgatttaccagctaaaactactcttgatgatatcggtcttgggttggccttttacaaa
tgccttgccgaactcgatcccaaggacttgcgtgtttatggcgctattaagcaggatcct
caattgatccagcagttaattgagctttaccatgagatgaccaaatcccagatgagtttt
ttggacttggagaatttaacagatgaggataagagggcggatttactcttgatttttgag
aaagtaacagcctatcttaatcaaggtcagttagcccagggaagtcagttgtcccatttg
attgaggctattgagaatgacaaggtaagtagtgattttaatcaaatcaccttggtcatt
gacggctttactcgtttttctgctgaggaagagcgggttgtggacttacttcacggcaaa
ggtgttgagattgttatcggggcttatgctagtaagaaagcctataccagtccttttagc
gagggcaatctctaccaagccagcgtaaaatttctccatcatctggcttctaaataccaa
acgcctgctcaggactgttctcaaactcatgagaagatggatagttttgacaaggcctct
cgtttgttggagtcttcttatgacttttcagaactcgctttggatgtcgatgagaaagac
cgtgaaaatttacaaatctggtcttgtttgacgcaaaaggaggagttggagctagtagcc
cgtagtattcgtcagaaattacatgagaactcagacctgagctacaagcattttcgtatt
ctcttgggggatgtagcttcttaccagttatctctcaaaaccatttttgaccagtatcag
attcctttttatcttggtagaagcgaagccatggctcatcatcccttgactcagtttgtc
gagtctattttagctttaaaacgttaccgttttcgtcaggaggatttgattaatcttctt
agaactgatttgtatactgacctcagtcagtctgatattgatgcttttgagcaatatatc
cgctatcttggtatcaatggcttgccagcctttcagcaaatcttcaccaaatcccaccat
ggaaaatttaatcttgagcgtttgaatgtcctccgcctgagaattttagcacctcttgaa
accctctttgccagccgaaaacaaaaggctgaaaacctcctacaaaaatggagtgtcttt
ctaaaagaaggagctgtgaccaagcagttacaagatttgacaaccactttggaagctgta
gaacaggaaagacaagccgaagtttggaaggctttctgccatgttttagaacaatttgcg
actgtttttgctggttcacaggttagtctggaagacttcctagccttgctccattctgga
atgagtttgtcccaataccgtaccattccagcaacagtggacactgttctggtgcagagt
tacgatttgattgcaccattgactgctgactttgtctatgctattggactaactcaggac
aatttaccaaaaatttctcaaaacaccagtcttctgacagatgaagaaaggcaaaaccta
aaccaagcgaccgaagaaggcgttcaattactgattgccagcagtgaaaatctcaagaaa
aatcgctacactatgctttccttggtcaattctgctcgtaagcagttgttcttgtcggct
ccaagcctttttaacgaaagtgaaagtaaggaatctgcctatcttcaagagttgatccat
tttggatttaggcggagagagaagaggatgaatcacaaaggactgtctaaggaggatatg
gggtcctatcacagtcttttgtctagtctggttgcctatcaccagcagggtgagatgagc
gatactgagcaagatttgacttttgtcaaggttctgtcgcgtgtcataggtaaaaaacta
gatctgcaaggtctggaaaatccagctatcccaaccagtccaagcagcaagaccttagcc
aaggacaccttgcaagctctctatcctgccaaacaggagttttacctgtctacgtcgggt
ttgacagagttttatcgcaatgaatacagttatttcctacgctacgttttaggcttgcag
gaggaattacgtttgcgtcctgatgcccgtagtcacgggaatttcttgcatcgtatcttt
gaacgcgccttacagttgcctaatgaagattcctttgaccaacgtctagaacaagctatt
caagaaaccagtcaagaacgcgaatttgaagctatttatcaagaaagtttggaagcccag
tttaccaaggaagttttgcttgatgttgcacggacgactggacatattctccgacacaat
ccagccatcgaaaccatcaaagaagaagcaaattttggtggaaaagaccaagcctttatt
caattagacaatggacgcagtgtctttgtacgaggcaaggtggaccggattgaccgtttg
aaagctaatggagcgataggagtagtagactacaaatccagtctgactcagttccagttt
cctcatttctttaatgggctcaattctcagttaccaacctatcttgctgccctaaaaaga
gaagggaagcagaactttttcggcgccatgtacttggaaatggctgaacctgtccaatct
ctgatggcggtaaaaagtctggcaggagcagtggtagaagccagcaaatctatgaaatac
caagggctcttcttggaaaaagaaagcagttatttaggcgaattttataacaaaaacaag
gctaatcaactgacagatgaggaatttcagctcctactggactacaatgcctatctttac
aagaaagctgctgagaagattttagcaggccggttcgccatcaatccttatactgaaaat
ggcagaagcattgccccatacgtccagcaacatcaggctattacaggctttgaagccaat
taccatctgggccaagcccgtttcctagaaaaattggacctagctgatggcaagcgtctg
gtcggagaaaaactcaagcaagcttggtttgaaaaaataagagaggagttaaatcgatga
DBGET
integrated database retrieval system
