Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_01266
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Entry
HMPREF1038_01266 CDS
T02334
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spng03032
]
HMPREF1038_01266 (topA)
03400 DNA repair and recombination proteins [BR:
spng03400
]
HMPREF1038_01266 (topA)
Enzymes [BR:
spng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMPREF1038_01266 (topA)
DNA replication proteins [BR:
spng03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF1038_01266 (topA)
DNA repair and recombination proteins [BR:
spng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF1038_01266 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF2996
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFS43302
LinkDB
All DBs
Position
complement(1173613..1175700)
Genome browser
AA seq
695 aa
AA seq
DB search
MATATKKKKSTVKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSSMSVDIENN
YEPQYINIRGKGPLINDLKKEAKKANKVFLASDPDREGEAISWHLAHILNLDENDANRVV
FNEITKDAVKNAFKEPRKIDMDLVDAQQARRILDRLVGYSISPILWKKVKKGLSAGRVQS
IALKLIIDRENEINAFQPEEYWTVDAVFKKGTKQFHASFYGVDGKKMKLTSNDEVKEVLS
RLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVAQQLYEGINIGS
GVQGLITYMRTDSTRISPVAQNEAASFITDRFGSKYSKHGSKVKNASGAQDAHEAIRPSS
VFNTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMAVKLSQNGVQFAANGSQVKF
DGYLAIYNDSDKNKMLPDMAVGDVVKQVNSKPEQHFTQPPARYSEATLIKTLEENGVGRP
STYAPTIETIRKRYYVRLAAKRFEPTELGEIVNKLIVEYFPDIVNVTFTAEMEGKLDDVE
VGKEQWRRVIDAFYKPFSKEVAKAEEEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGKFY
ACSNFPDCRHTQAIVKEIGVECPSCHQGQIIERKTKRNRLFYGCNRYPECEFTSWDKPVG
RDCPKCGNFLMEKKVRGGGKQVVCSKGDYEEEKIK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggctacggcaacaaaaaagaaaaaatcaacagttaaaaaaaatctagtcatcgtggag
tcgcctgctaaggccaagacgattgaaaaatatctaggcagaaactacaaggttttagcc
agtgtcgggcatatccgtgatttgaagaaatccagtatgtccgtcgatattgaaaataat
tatgaaccgcaatatattaatatccgaggaaaaggccctcttatcaatgacttgaaaaaa
gaagctaaaaaagctaataaagtttttctcgcgagtgacccggaccgtgaaggagaagcg
atttcttggcatttggcccatattctcaacttggatgaaaatgatgccaaccgtgtggtc
ttcaatgaaatcaccaaggatgcagtcaaaaatgcttttaaagaacctcgtaagatcgat
atggacttggtcgatgcccaacaagctcgtcggatcttggaccgtttggtagggtattcg
atttcgcctattttgtggaagaaggtcaagaagggcttgtcagcaggtcgcgttcagtcc
attgcccttaaactcatcattgaccgtgaaaatgaaatcaatgccttccagccagaagaa
tactggacagttgatgctgtctttaaaaagggaaccaaacaatttcatgcttccttctat
ggagtagatggtaaaaagatgaaactgaccagcaatgacgaggtcaaggaagtcttgtct
cgtctgacgagtaaagacttttcagtggatcaggtggataaaaaagagcgcaagcgcaat
gctcctttaccctataccacttcatctatgcagatggatgctgccaataaaatcaatttc
cgtactcgaaaaaccatgatggttgcccaacagctctatgaaggaattaatattggttct
ggtgttcaaggtttgattacctatatgcgtaccgattcgactcgtatcagtcctgtagcg
caaaatgaggcggcaagcttcattacggatcgttttggtagcaagtattctaagcacggt
agcaaggtcaaaaacgcatcaggtgctcaggatgcccatgaggctattcgtccgtcgagt
gtctttaatacaccagaaagcatcgctaagtatctggacaaggatcagctcaagctatat
acccttatctggaatcgttttgtggctagccagatgacagcggccgtttttgataccatg
gctgttaaattgtctcaaaatggagttcaatttgctgccaatggtagtcaggttaagttt
gatggttatcttgccatttataatgattctgacaagaataaaatgctaccagatatggct
gttggagatgtggtcaaacaggttaatagcaaaccagagcaacatttcacccaaccgcct
gcccgttattctgaagcaacactgattaaaaccttagaggaaaatggggttggacgtcca
tcaacctatgcgccaaccattgaaaccattcggaaacgttattatgttcgcctggcagcc
aaacgttttgaaccgacagagttgggagaaattgtcaataagctcatcgttgaatatttc
ccagatatcgtaaacgtgaccttcacagctgaaatggaaggtaaactggatgatgtcgaa
gttggaaaagagcagtggcgacgggtcattgatgccttttacaaaccattctctaaagaa
gttgccaaggctgaagaagaaatggaaaaaatccagattaaggatgaaccagctggattt
gactgtgaagtgtgtggcagtccaatggtcattaaacttggtcgttttggtaaattctac
gcttgtagcaatttcccagattgccgtcatacccaagcaatcgtgaaagagattggtgtt
gagtgtccaagctgtcatcagggacaaattattgagcgaaaaaccaagcgtaatcgcctc
ttctatggttgcaatcgctatccagaatgtgaatttacctcttgggacaagcctgttggt
cgtgactgtccaaaatgtggcaacttcctcatggagaaaaaagtccgtggtggtggcaag
caggttgtttgtagcaaaggcgactacgaggaagaaaagattaaataa
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