Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_01716
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Entry
HMPREF1038_01716 CDS
T02334
Symbol
priA
Name
(GenBank) DNA replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Pathway
spng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF1038_01716 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spng03400
]
HMPREF1038_01716 (priA)
Enzymes [BR:
spng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF1038_01716 (priA)
DNA repair and recombination proteins [BR:
spng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF1038_01716 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
SLFN-g3_helicase
Zn_ribbon_6
AAA_30
ADDB_N
nSTAND_NTPase5
PIF1
Motif
Other DBs
NCBI-ProteinID:
AFS43740
LinkDB
All DBs
Position
complement(1584904..1587300)
Genome browser
AA seq
798 aa
AA seq
DB search
MALAKIIVDVPLMQTDQPYSYRIPEEFEEMLEVGMRVHVPFGKGNRLIQGIVLGLESQSD
GEEMEQDLKDIAEVLDFSPVLTPEQLWLAEELRKSVFSYKISILKAMLPGFLNSSYDKIL
YPLEGLSQEERVRLFGSEDSLAFSSLDLAKQAEMMRLTRKGLLGLEYQAVDQKKVKTQSW
YEVDHAQLEGVEISTRAKKKLELRDYLLSHPESASLASLLESYSREQVNFFVDQGAVTIV
QKEVQRSAAYFEGIEASRPLELNPEQRQARDAVVSSIGSSQPPFLLQGITGSGKTEVYLQ
IIQGALDKGKTAILLVPEISLTPQMTERFIARFGDKVAILHSGLSNGEKYDEWRKVERGD
AQVVVGARSAIFAPLKNLGVMIIDEEHEAAYKQDSNPRYHAREVAILRAQYNQATLVLGS
ATPSLESRARAGKGVYQHLRLTQRANPLATIPEVQVIDFRDYIGQNETSNFTPPLLEAIQ
DRLVKKEQVVLMLNRRGYSSFVMCRECGTVDTCPNCDISLTLHMDTKTMNCHYCGFSKDI
PQVCPNCKSHSIRYYGTGTQKAYDELAELFPQARILRMDVDTTRKKGSHQALLDQFGRGE
ADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQVAGRAGRAEKAG
QVLIQSYNSQHYAIRFAKDQDYEGFYAYEMGIRRQLGYPPYYFTIGITLSHKKEEEVFKR
AYEVMNILRSGLSETSPILGPTPKPIARTHNLYHYQILIKYRLEDELGPTLNQVLALTQE
RENSELRLSIDHEPQQFL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggccctagctaagattatcgtagatgtgcccttgatgcagacggaccagccctatagt
tacaggattccggaggaatttgaggaaatgctggaagttgggatgcgggttcatgtgcct
tttggtaagggtaatcgcctgattcaagggattgttcttggtttggagtcccaatcagat
ggagaagagatggagcaagatttaaaagatattgcagaggtgctggatttttctcctgtt
ctcacgccagaacaactctggctggctgaggagttacgcaaatctgtcttctcctacaaa
atctctatcctcaaggccatgcttccagggtttctgaattctagctatgacaagattctc
tatcctctggaaggcttgagtcaggaagaacgagtgcgcctgtttggttcagaagattcg
ctagccttttcttcactagaccttgccaagcaagctgaaatgatgcgtttgactagaaaa
ggcctgcttggtctggaatatcaggcagtcgatcaaaagaaggtcaagacccagtcttgg
tatgaggttgaccatgcccaattagaaggtgttgagatttctacacgtgccaagaaaaag
ttggaactgagagattatctgctgtctcatccagagagcgcttccttggctagcttgtta
gagtcctactcgcgagagcaagtcaacttctttgtggatcaaggtgctgttaccatagtc
caaaaggaagttcaacgctcggctgcttattttgaaggaattgaagcaagtagacctttg
gagttaaatccagaacaaagacaggcgcgtgatgcggttgtgagttctattggcagttct
caacctccctttctacttcaagggattacaggaagtgggaagaccgaggtttacttgcag
attatccaaggtgccctggataagggcaagacagctattttgctggtacctgagatttcc
ttgactcctcagatgaccgagcgttttatagcacgttttggggacaaggtagccattctt
cactcaggattatccaatggtgaaaagtatgatgaatggcgcaaggtggagcgtggcgat
gcccaagttgttgttggtgccagatctgctatctttgctcctctgaaaaatctgggtgtc
atgattattgatgaagagcatgaagcggcttataagcaggacagcaatccccgttaccat
gccagagaggtagctattttacgggctcagtataatcaagcaactctggtacttggatct
gcaacgccgagcttagagagccgggcacgtgctggcaaaggcgtctatcaacacttacgt
ctaacccaacgtgccaatcctttggctacaatccctgaggttcaagtgattgactttcga
gactatatcggacaaaatgagacgtcaaactttacgcctcctttgctagaggctatccaa
gaccgtctggttaaaaaagagcaggtggttctcatgctcaatcgccgtggttattctagc
tttgtcatgtgtcgggagtgtgggacggtggatacttgtcccaactgcgatatttctctg
accttgcatatggataccaagactatgaactgccattattgtggtttctcgaaggatatt
cctcaggtctgtcctaactgtaagagccacagtattcgttactatgggacgggaactcag
aaggcttatgatgagctagcagaactctttccccaagctcgcattttgaggatggatgtg
gatacgactcgaaagaaaggcagtcaccaagccttgcttgaccagtttgggcgaggggaa
gcggatattttacttggtactcagatgattgcaaagggtttggattttcccaatgttacc
ctagtcggagttctaaatgcggatacggccttgaatctgcctgatttccgttcttctgag
agaaccttccagctcttgactcaggtggcaggtcgagcaggtcgggctgaaaaagcaggt
caagtcttgatacagtcctacaattcgcagcactatgctattcgatttgccaaggatcaa
gattacgaaggcttttatgcctatgaaatgggaatcagacgacaactcggctatccacct
tactatttcacgattggtattaccctttctcacaagaaagaagaagaggttttcaaacgt
gcctatgaagtcatgaacattttgcggtcaggcttgtcagagaccagtcccattctgggg
ccaacgccaaaaccgattgcccgtacccacaacctctatcattaccagattttaattaaa
taccgtttagaagatgagctggggccgaccctcaaccaggtcttggccttgactcaagaa
cgggaaaatagtgagctccgtctcagcattgaccatgagccgcagcaatttttataa
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