Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_01719
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Entry
HMPREF1038_01719 CDS
T02334
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Pathway
spng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF1038_01719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spng03019
]
HMPREF1038_01719
Messenger RNA biogenesis [BR:
spng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF1038_01719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
V-ATPase_G
DivIVA
KH_KhpA-B
dUTPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFS43743
LinkDB
All DBs
Position
complement(1588461..1590074)
Genome browser
AA seq
537 aa
AA seq
DB search
MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatgtcgcttgcgattgctgtttttgccgtcatcattggtttagtcattgga
tatgtcagcatctcagctaagatgaaatcatctcaggaagctgcagagttgatgctttta
aatgctgaacaagaagcaactaatttacgtggacaagctgagcgtgaagcggatttactt
gttaatgaagccaaacgtgaaagcaagtctcttaaaaaagaagcactattggaggccaaa
gaagaagccagaaaataccgtgaagaagtggacgctgaattcaaatcagaacgtcaagaa
ctcaaacaaatcgaaagtcgtttgacagagagagctactagccttgaccgtaaggacgac
aatttgacgagtaaagaacaaacacttgaacaaaaagaacaaagtatttctgatagagcg
aaaaaccttgatgcgcgtgaagagcaattagaggaagtcgaaagacaaaaagaagcagaa
ctagagcgtattggtgctctgtctcaggcagaagcacgagatattatcttggctcagaca
gaggaaaacttgaccagggagattgccagtcgcattcgcgaagctgagcaagaggtcaag
gaacgttctgacaaaatggccaaggacatcttggttcaagctatgcaacgtatcgctggt
gaatatgtagcggagtcaacaaactcaacggttcatctgccagacgatactatgaaggga
cgcattattggtcgtgaaggtcgtaacattcgtacctttgaaagtttgacaggggtcgat
gtgattatcgacgatacaccagaagtggtgaccttgtcaggatttgatccgattcgtcgt
gagattgcccgtatgactatggaaatgttgctcaaagatggtcgtatacatccagctcgt
atcgaagagttggttgagaaaaaccgtcaagagattgacaataagattcgtgaatacggt
gaggctgctgcctatgaaattggtgcgccaaaccttcatccagacttgatgaagattatg
ggacgtttgcagttccgtacttcatatggacaaaatgttttgcgccattcgattgaggtt
gctaagttggctggtatcatggcgagcgaacttggtgaaaatgcggctcttgcccgtcgt
gctggattccttcacgatatcgggaaagccattgaccatgaggttgaaggtagccacgtt
gaaatcggtatggaattggcccgtaagtacaaggaacccccagttgtggtgaatacgatt
gctagtcaccacggagatgttgaagctgagagcgtgatagcagttattgtcgctgcagca
gatgccttgagcgcagcccgtccaggtgctcgtagtgagtctcttgaaagctacatcaag
cgtctccatgatttggaagaaattgctaacggctttgaaggagtgcaaactagctttgcc
cttcaagcaggacgtgaaattcgtatcatggtcaatccaggaaaaatcaaggacgacaaa
gtcacaatcttggctcacaaagttcgtaagaaaattgaaaacaatctcgattatccagga
aatatcaaggtaaccgtgattcgcgagcttcgtgcagtagattatgctaaataa
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