Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_01961
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Entry
HMPREF1038_01961 CDS
T02334
Symbol
cbf1
Name
(GenBank) cmp-binding-factor 1
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spng03019
]
HMPREF1038_01961 (cbf1)
Messenger RNA biogenesis [BR:
spng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF1038_01961 (cbf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AFS43953
LinkDB
All DBs
Position
complement(1792753..1793706)
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AA seq
317 aa
AA seq
DB search
MRKNMKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQDDSGEIDGKLWDAQPHNI
EAFTAGKVVHMKGRREVYNNTPQVNQITLRLPQAGEPNDPADFKVKSPVDVKEIRDYMSQ
MIFKIENPVWQRIVRNLYTKYDKEFYSYPAAKTNHHAFETGLAYHTATMVRLADAISEVY
PQLNKSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIALIDSEITKTVMELGIDDT
KEEVVLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDASMMMMSTALALVDKGEMS
NKIFAMDNRSFYKPDLD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaatatgaagattagtcacatgaaaaaagatgagttatttgaaggcttttac
ctaatcaaatcagctgacctgaggcaaactcgagctgggaaaaactacctagcctttacc
ttccaagatgatagtggcgagattgatgggaagctctgggatgcccaacctcataacatt
gaggcctttaccgcaggtaaggttgtccacatgaaaggacgccgagaagtttataacaat
acccctcaagtcaatcaaattactctccgcctgcctcaagctggtgaacccaatgaccca
gctgatttcaaggtcaagtcaccagttgatgtcaaggaaattcgtgactacatgtcgcaa
atgattttcaaaattgaaaatcctgtctggcaacggattgtccgaaatctctacaccaag
tatgataaggaattctactcctatccagctgccaagaccaaccaccatgcctttgaaacg
ggcttggcctatcatacggcgaccatggtgcgtttggcagacgctattagcgaagtttat
cctcagctcaataagagcctgctctatgcggggattatgttgcacgacttggctaaggtc
atcgagttgacgggaccagaccagaccgagtacacggtcagaggcaatcttcttggacat
atcgctctgattgatagcgaaattaccaagacagttatggaactcggcatcgatgatacc
aaggaagaagtcgttttgcttcgtcatgtcatcctcagtcaccacggcttgcttgaatat
ggaagtccagtccgtccacgtattatggaggcagagattatccatatgattgacaatctg
gatgcaagcatgatgatgatgtcaacagctctggctttggtggataaaggagagatgtcc
aataaaatcttcgctatggataatcgttccttctataaaccagatttagattaa
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